RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HMX1Q9NP08 348 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-221ENST00000622702 ASTN1O14525 1302 aa22.62■■□□□ 1.21
PDLIM2-221ENST00000622702 FAM205CA6NFA0 338 aa22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 IGHA2P01877 340 aa22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 ARHGEF16Q5VV41 709 aa22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 ZNF467Q7Z7K2 595 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 TBCKQ8TEA7 893 aa22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 PDCD2LQ9BRP1 358 aa22.61■■□□□ 1.21
PDLIM2-221ENST00000622702 POTEFA5A3E0 1075 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 ALDH5A1P51649 535 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 INF2Q27J81 1249 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 IWS1Q96ST2 819 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 TINF2Q9BSI4 451 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 EIF2AK2P19525 551 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 TRAPPC10P48553 1259 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 ARHGAP4P98171 946 aa22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 FOXD4L5Q5VV16 416 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 FOXD4L4Q8WXT5 416 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-221ENST00000622702 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 EDIL3O43854 480 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 GJB1P08034 283 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 CYP3A4P08684 503 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 EDNRBP24530 442 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 CCND3P30281 292 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 USP11P51784 963 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 PGM5Q15124 567 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 MYSM1Q5VVJ2 828 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 PCNX4Q63HM2 1172 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 XRRA1Q6P2D8 792 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 NEK8Q86SG6 692 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 MORC4Q8TE76 937 aa22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 PAK6Q9NQU5 681 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-221ENST00000622702 MYH7BA7E2Y1 1941 aa22.58■■□□□ 1.21
PDLIM2-221ENST00000622702 B4DLN1 442 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 NR3C2P08235 984 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 RILPL1Q5EBL4 403 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 PRAMEF19Q5SWL8 479 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 VSIG10LQ86VR7 867 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 IL31RAQ8NI17 732 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 DEFB118Q96PH6 123 aa22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 MPHOSPH6Q99547 160 aaKnown RBP22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 NOL7Q9UMY1 257 aaKnown RBP22.58■■□□□ 1.2
PDLIM2-221ENST00000622702 ASB14A6NK59 587 aa22.57■■□□□ 1.2
PDLIM2-221ENST00000622702 CIITAP33076 1130 aa22.57■■□□□ 1.2
PDLIM2-221ENST00000622702 MOXD1Q6UVY6 613 aa22.57■■□□□ 1.2
PDLIM2-221ENST00000622702 MAMDC4Q6UXC1 1216 aa22.57■■□□□ 1.2
PDLIM2-221ENST00000622702 MSL3Q8N5Y2 521 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-221ENST00000622702 EN2P19622 333 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 CNGA1P29973 690 aa22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 CCND2P30279 289 aa22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 TOB1P50616 345 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 TRPV1Q8NER1 839 aa22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 NAP1L4Q99733 375 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 ATP6V1DQ9Y5K8 247 aa22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 SYNGAP1Q96PV0 1343 aa22.56■■□□□ 1.2
PDLIM2-221ENST00000622702 STAM2O75886 525 aa22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 CYBAP13498 195 aa22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 GJA8P48165 433 aa22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 MRPS9P82933 396 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 PPP4R3AQ6IN85 833 aa22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 FAM173BQ6P4H8 233 aa22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 U2AF1L4Q8WU68 220 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-221ENST00000622702 MCM3APO60318 1980 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 CYP3A7-CYP3A51PA0A087WV96 503 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 SGPL1O95470 568 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 GCFC2P16383 781 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 CYP3A7P24462 503 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 STXBP2Q15833 593 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 LETM2Q2VYF4 491 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 MBOAT7Q96N66 472 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 SNAI1O95863 264 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 MYCLP12524 364 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 PDE4DQ08499 809 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 ORC2Q13416 577 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 TTC38Q5R3I4 469 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 ARMCX2Q7L311 632 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 CNPY2Q9Y2B0 182 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 UBIAD1Q9Y5Z9 338 aa22.54■■□□□ 1.2
PDLIM2-221ENST00000622702 WNT7AO00755 349 aa22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 EIF3JO75822 258 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 TFRCP02786 760 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 CEP55Q53EZ4 464 aa22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 ATL3Q6DD88 541 aa22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 NIPA1Q7RTP0 329 aa22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 NRBP1Q9UHY1 535 aa22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 DDX49Q9Y6V7 483 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-221ENST00000622702 LRRC37A2A6NM11 1700 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 FAM86B1E9PN63 330 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 CCNT1O60563 726 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 TDP2O95551 362 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 FAM86B2P0C5J1 330 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 ATP2B1P20020 1258 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 ZNF76P36508 570 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 INPP4AQ96PE3 977 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 MXRA8Q9BRK3 442 aa22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-221ENST00000622702 IGLV3-22A0A075B6J6 115 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms