RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 BTDP43251 543 aa11.85□□□□□ -0.51
CDH1-214ENST00000621016 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
CDH1-214ENST00000621016 LMCD1Q9NZU5 365 aa11.85□□□□□ -0.51
CDH1-214ENST00000621016 TTF2Q9UNY4 1162 aaKnown RBP11.85□□□□□ -0.51
CDH1-214ENST00000621016 MYH7P12883 1935 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 CEP112Q8N8E3 955 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 ORC4O43929 436 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
CDH1-214ENST00000621016 PYGBP11216 843 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 PAX3P23760 479 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
CDH1-214ENST00000621016 PBX1P40424 430 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 SPAG1Q07617 926 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 GRIK3Q13003 919 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 KIAA0825Q8IV33 1275 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 AFAP1L1Q8TED9 768 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 CNOT6LQ96LI5 555 aaKnown RBP11.84□□□□□ -0.51
CDH1-214ENST00000621016 MMS19Q96T76 1030 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 MXD3Q9BW11 206 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 NLRC4Q9NPP4 1024 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
CDH1-214ENST00000621016 DDX20Q9UHI6 824 aaKnown RBP11.84□□□□□ -0.51
CDH1-214ENST00000621016 NUP98P52948 1817 aa11.84□□□□□ -0.51
CDH1-214ENST00000621016 OATP04181 439 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 ABCD1P33897 745 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 ARHGAP25P42331 645 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 UBE2SQ16763 222 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 GNPTABQ3T906 1256 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 HDXQ7Z353 690 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 ADSSL1Q8N142 457 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 CEP95Q96GE4 821 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
CDH1-214ENST00000621016 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
CDH1-214ENST00000621016 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 H7C1D1 291 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 KIAA0754O94854 1291 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 SCNN1DP51172 638 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 TRAF1Q13077 416 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 ANKRD2Q9GZV1 360 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 LIMA1Q9UHB6 759 aaKnown RBP11.83□□□□□ -0.52
CDH1-214ENST00000621016 APBA1Q02410 837 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 CRYMQ14894 314 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 C4orf32Q8N8J7 132 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
CDH1-214ENST00000621016 JAKMIP2Q96AA8 810 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 YIPF2Q9BWQ6 316 aa11.83□□□□□ -0.52
CDH1-214ENST00000621016 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 ERLIN1O75477 346 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 TDP2O95551 362 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 CDK8P49336 464 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 RCAN1P53805 252 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 CCDC47Q96A33 483 aaKnown RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 A0A1B0GVG6 124 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 STXBP3O00186 592 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 AKR1B10O60218 316 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 OR52Z1P0C646 297 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 SNAP25P60880 206 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 NONOQ15233 471 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH1-214ENST00000621016 TDRD12Q587J7 1177 aaKnown RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 NHEJ1Q9H9Q4 299 aaPredicted RBP11.82□□□□□ -0.52
CDH1-214ENST00000621016 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
CDH1-214ENST00000621016 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 ANKRD33BA6NCL7 494 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 ATP8B1O43520 1251 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 BUB1O43683 1085 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 ZEB2O60315 1214 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 RASA1P20936 1047 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 CDR1P51861 262 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 GTF2IP78347 998 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 C2orf54Q08AI8 447 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 CASP8Q14790 479 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 ELOA2Q8IYF1 753 aaPredicted RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 CNBD1Q8NA66 436 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 FAM210AQ96ND0 272 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 MLXIPQ9HAP2 919 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 BARHL2Q9NY43 387 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 CCDC151A5D8V7 595 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 LGALS16A8MUM7 142 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 CACNB3P54284 484 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms