RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 GH1P01241 217 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 MMP3P08254 477 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 PTPN11Q06124 597 aaPredicted RBP13□□□□□ -0.33
TARDBP-221ENST00000619555 STXBP2Q15833 593 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 RETREG2Q8NC44 543 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 IWS1Q96ST2 819 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 MAF1Q9H063 256 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 PRRC2BQ5JSZ5 2229 aaKnown RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 EIF3JO75822 258 aaKnown RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 NR3C2P08235 984 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 PFKMP08237 780 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 IQCF3P0C7M6 154 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 ATP2A2P16615 1042 aaKnown RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 IGFBP4P22692 258 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 PTH1RQ03431 593 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 SLC35G1Q2M3R5 365 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 KAT2BQ92831 832 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 MTMR8Q96EF0 704 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 CTAGE1Q96RT6 745 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 SENP2Q9HC62 589 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
TARDBP-221ENST00000619555 NOD1Q9Y239 953 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 TAF6LQ9Y6J9 622 aa12.99□□□□□ -0.33
TARDBP-221ENST00000619555 RBAK-RBAKDNI3L0D1 243 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 CYP21A2P08686 494 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
TARDBP-221ENST00000619555 CHMLP26374 656 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 HSD17B4P51659 736 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 PTGISQ16647 500 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 GDF6Q6KF10 455 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-221ENST00000619555 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
TARDBP-221ENST00000619555 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
TARDBP-221ENST00000619555 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
TARDBP-221ENST00000619555 ZBTB5O15062 677 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 SORBS3O60504 671 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 RGS20O76081 388 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 MYCLP12524 364 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-221ENST00000619555 ACTN1P12814 892 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 HOXA13P31271 388 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-221ENST00000619555 RFC2P35250 354 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 GHRHRQ02643 423 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 TRDNQ13061 729 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 BFSP2Q13515 415 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 GRM4Q14833 912 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-221ENST00000619555 PIGSQ96S52 555 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 PDCD2LQ9BRP1 358 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
TARDBP-221ENST00000619555 RFXAPO00287 272 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 PSEN2P49810 448 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 LAMC2Q13753 1193 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 GPNMBQ14956 572 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 DGKDQ16760 1214 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 VSIG10LQ86VR7 867 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 SESTD1Q86VW0 696 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
TARDBP-221ENST00000619555 IL31RAQ8NI17 732 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
TARDBP-221ENST00000619555 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 RIOX1Q9H6W3 641 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 HDAC6Q9UBN7 1215 aa12.96□□□□□ -0.33
TARDBP-221ENST00000619555 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 E7EWF7 191 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 CYTH3O43739 400 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 CA3P07451 260 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 ZNF286BP0CG31 522 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
TARDBP-221ENST00000619555 EMID1Q96A84 441 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-221ENST00000619555 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
TARDBP-221ENST00000619555 ERICH2A1L162 156 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-221ENST00000619555 SGSM2O43147 1006 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 ARHGEF15O94989 841 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 SELPP16109 830 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 ANTXR2P58335 489 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-221ENST00000619555 SP2Q02086 613 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 TROAPQ12815 778 aa12.94□□□□□ -0.34
TARDBP-221ENST00000619555 MFSD10Q14728 455 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms