RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 EEPD1Q7L9B9 569 aa8.14□□□□□ -1.11
SNX25-207ENST00000618785 FBXO16Q8IX29 292 aaPredicted RBP8.14□□□□□ -1.11
SNX25-207ENST00000618785 ARRDC4Q8NCT1 418 aa8.14□□□□□ -1.11
SNX25-207ENST00000618785 ZMYND12Q9H0C1 365 aa8.14□□□□□ -1.11
SNX25-207ENST00000618785 SPC25Q9HBM1 224 aa8.14□□□□□ -1.11
SNX25-207ENST00000618785 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 DUSP11O75319 330 aaKnown RBP8.13□□□□□ -1.11
SNX25-207ENST00000618785 STAM2O75886 525 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 MYCLP12524 364 aaPredicted RBP8.13□□□□□ -1.11
SNX25-207ENST00000618785 TNFAIP2Q03169 654 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 AP3B2Q13367 1082 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 PGM5Q15124 567 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 UBE2SQ16763 222 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 SCFD2Q8WU76 684 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 LLPHQ9BRT6 129 aaKnown RBP8.13□□□□□ -1.11
SNX25-207ENST00000618785 PRO3102Q9H379 93 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 FRMPD4Q14CM0 1322 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
SNX25-207ENST00000618785 FARP2O94887 1054 aaPredicted RBP8.13□□□□□ -1.11
SNX25-207ENST00000618785 NLRP5P59047 1200 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 GALNT17Q6IS24 598 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 TAPT1Q6NXT6 567 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 SHISA4Q96DD7 197 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 XPNPEP3Q9NQH7 507 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 VPS54Q9P1Q0 977 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 PCDHA6Q9UN73 950 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 PCDHA8Q9Y5H6 950 aa8.13□□□□□ -1.11
SNX25-207ENST00000618785 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNX25-207ENST00000618785 CTDNEP1O95476 244 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 ADCYAP1R1P41586 468 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 TTLL4Q14679 1199 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 ANO1Q5XXA6 986 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 RNF180Q86T96 592 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 NSUN7Q8NE18 718 aaKnown RBP8.12□□□□□ -1.11
SNX25-207ENST00000618785 AP5M1Q9H0R1 490 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 Q9Y3F1 56 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 DDX49Q9Y6V7 483 aaKnown RBP8.12□□□□□ -1.11
SNX25-207ENST00000618785 LCTP09848 1927 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 HMGN5P82970 282 aaKnown RBP8.12□□□□□ -1.11
SNX25-207ENST00000618785 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 KCNV1Q6PIU1 500 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
SNX25-207ENST00000618785 UBE2Q2Q8WVN8 375 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 ALG1Q9BT22 464 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 WDR11Q9BZH6 1224 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 PDGFCQ9NRA1 345 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 KBTBD13C9JR72 458 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 DUSP28Q4G0W2 176 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 PCNX4Q63HM2 1172 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 SEPT14Q6ZU15 432 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 NECAB2Q7Z6G3 386 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 IL31RAQ8NI17 732 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 ANO3Q9BYT9 981 aa8.12□□□□□ -1.11
SNX25-207ENST00000618785 DNM1LO00429 736 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 CLK2P49760 499 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 GJA9P57773 515 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 TRIM29Q14134 588 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 JAKMIP3Q5VZ66 844 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 NLRX1Q86UT6 975 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 UPF3AQ9H1J1 476 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 MRVI1Q9Y6F6 885 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 KIAA0100Q14667 2235 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 LRRC37A2A6NM11 1700 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 TXNP10599 105 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 SMPD1P17405 629 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 ST3GAL1Q11201 340 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 NBR1Q14596 966 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 LRRC41Q15345 812 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 TLK2Q86UE8 772 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 BLIDQ8IZY5 108 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 DAGLBQ8NCG7 672 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 TMX3Q96JJ7 454 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 AIFM3Q96NN9 605 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 TSEN34Q9BSV6 310 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
SNX25-207ENST00000618785 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 SYNRGQ9UMZ2 1314 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 MCM3APO60318 1980 aa8.11□□□□□ -1.11
SNX25-207ENST00000618785 DYNC1LI2O43237 492 aaPredicted RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 ZEB2O60315 1214 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 JAK2O60674 1132 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 PGK1P00558 417 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 TGFB3P10600 412 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 FDPSP14324 419 aaKnown RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 CST5P28325 142 aaPredicted RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 SREBF1P36956 1147 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 NKX3-2P78367 333 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 BRDTQ58F21 947 aaPredicted RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 PCSK9Q8NBP7 692 aaKnown RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 LENG1Q96BZ8 264 aaPredicted RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 CDHR1Q96JP9 859 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 INPP4AQ96PE3 977 aaPredicted RBP8.1□□□□□ -1.11
SNX25-207ENST00000618785 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
SNX25-207ENST00000618785 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms