RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 TSPY8P0CW00 308 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 SRGNP10124 158 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 MYBL2P10244 700 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 BTDP43251 543 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 CDK8P49336 464 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 SPAG1Q07617 926 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 GRB10Q13322 594 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 KIF4BQ2VIQ3 1234 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 RC3H1Q5TC82 1133 aaKnown RBP4.84□□□□□ -1.64
SEC22B-202ENST00000618538 DTHD1Q6ZMT9 781 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 CEP95Q96GE4 821 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 PNMA5Q96PV4 448 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 PIGSQ96S52 555 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 MMS19Q96T76 1030 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 NAPGQ99747 312 aaPredicted RBP4.84□□□□□ -1.64
SEC22B-202ENST00000618538 THAP9Q9H5L6 903 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 PDE11AQ9HCR9 933 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 ARFGAP3Q9NP61 516 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 RMND1Q9NWS8 449 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 CAPN11Q9UMQ6 739 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 GUCA1BQ9UMX6 200 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 FOCADQ5VW36 1801 aa4.84□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L5A8MUK1 530 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 PSMD14O00487 310 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 ZNF185O15231 689 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 PPP1R11O60927 126 aaPredicted RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 TDP2O95551 362 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 S1PR4O95977 384 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 TPM1P09493 284 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 OR52Z1P0C646 297 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 EEF1GP26641 437 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 PRPHP41219 470 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 NOVP48745 357 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 HNRNPH2P55795 449 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 CYP27A1Q02318 531 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 GRAPQ13588 217 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 BRD3Q15059 726 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 ECM1Q16610 540 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 TSR1Q2NL82 804 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 LETM2Q2VYF4 491 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 BLOC1S3Q6QNY0 202 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 C16orf86Q6ZW13 317 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 KRT26Q7Z3Y9 468 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 CABP7Q86V35 215 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 OR8K1Q8NGG5 319 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 GRAPLQ8TC17 118 aaPredicted RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 SMCR8Q8TEV9 937 aaPredicted RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 HNRNPLLQ8WVV9 542 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 IRF7Q92985 503 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 P2RX5Q93086 422 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 GJA10Q969M2 543 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 CNOT6LQ96LI5 555 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 MTMR9Q96QG7 549 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 PURBQ96QR8 312 aaKnown RBP4.83□□□□□ -1.64
SEC22B-202ENST00000618538 TUBGCP2Q9BSJ2 902 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 SPZ1Q9BXG8 430 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 FGFBP2Q9BYJ0 223 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 SLC6A16Q9GZN6 736 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 NYXQ9GZU5 481 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 UBA5Q9GZZ9 404 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 MYO6Q9UM54 1294 aa4.83□□□□□ -1.64
SEC22B-202ENST00000618538 GPR75-ASB3A0A0A6YYF3 556 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 SMCO2A6NFE2 343 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 MYMKA6NI61 221 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 DPYSL4O14531 572 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CCNT1O60563 726 aaKnown RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 ERCC3P19447 782 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CCNE1P24864 410 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 UBA7P41226 1012 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 TECP42680 631 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 NAPAP54920 295 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 ATP2B2Q01814 1243 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 PDE4DQ08499 809 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 KCNMA1Q12791 1236 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 TRIM14Q14142 442 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 MCM6Q14566 821 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 WHAMMP3Q1A5X7 153 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 SHROOM1Q2M3G4 852 aaPredicted RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 JAKMIP3Q5VZ66 844 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 PAPD7Q5XG87 772 aaKnown RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 PRR5LQ6MZQ0 368 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 TMED8Q6PL24 325 aaPredicted RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 TPTE2Q6XPS3 522 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 LRRC55Q6ZSA7 311 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 ZSCAN29Q8IWY8 852 aaPredicted RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 GSPT2Q8IYD1 628 aaKnown RBP4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CSGALNACT2Q8N6G5 542 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC155Q8N6L0 562 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CEP112Q8N8E3 955 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 NEDD1Q8NHV4 660 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 WDR66Q8TBY9 1149 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 TBCKQ8TEA7 893 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 DDX12PQ92771 950 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 EYA3Q99504 573 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 C7orf25Q9BPX7 421 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 MKNK2Q9HBH9 465 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 CD209Q9NNX6 404 aa4.82□□□□□ -1.64
SEC22B-202ENST00000618538 LRRC4BQ9NT99 713 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms