RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 A0A1B0GTH6 734 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 A0A1W2PRG0 241 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 PSMD14O00487 310 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 MAP2K2P36507 400 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 NR1I3Q14994 352 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 TC2NQ8N9U0 490 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 CPLX3Q8WVH0 158 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 DHX36Q9H2U1 1008 aaKnown RBP12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 PRPHP41219 470 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 ECE1P42892 770 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 PAK1Q13153 545 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 CALCRLQ16602 461 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 ZNF658Q5TYW1 1059 aaPredicted RBP12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 SPECC1LQ69YQ0 1117 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 MTMR9Q96QG7 549 aa12.74□□□□□ -0.37
PCDHGA9-202ENST00000616887 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 FCER1AP12319 257 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 MTF1Q14872 753 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 USH1GQ495M9 461 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 GPATCH4Q5T3I0 446 aaKnown RBP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 TAB2Q9NYJ8 693 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 ADD3Q9UEY8 706 aaKnown RBP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 FAN1Q9Y2M0 1017 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 F5H6K3 240 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 LAD1O00515 517 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 NDUFB10O96000 172 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 CLK2P49760 499 aaKnown RBP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 PPP2R3AQ06190 1150 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 KLRC3Q07444 240 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 KCNK18Q7Z418 384 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 IGSF22Q8N9C0 903 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 PSMD1Q99460 953 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 MRIQ9BWK5 157 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 VPS16Q9H269 839 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
PCDHGA9-202ENST00000616887 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 MAP2K7O14733 419 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 GRB10Q13322 594 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 KRT31Q15323 416 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 ECM1Q16610 540 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 KIAA1755Q5JYT7 1200 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 MTMR8Q96EF0 704 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 DESI2Q9BSY9 194 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 KCNJ6P48051 423 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 HDLBPQ00341 1268 aaKnown RBP12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 STK4Q13043 487 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 IKQ13123 557 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 TOGARAM2Q6ZUX3 1019 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 HAS1Q92839 578 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 CUL5Q93034 780 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 ZSWIM4Q9H7M6 989 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 BLOC1S4Q9NUP1 217 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 PIM2Q9P1W9 311 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 RWDD2AQ9UIY3 292 aa12.72□□□□□ -0.37
PCDHGA9-202ENST00000616887 A0A0U1RQJ8 604 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 CCP110O43303 1012 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 MYO1BO43795 1136 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 PHACTR2O75167 634 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 ASIC1P78348 528 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 TMEM179Q6ZVK1 233 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 IRF2BP1Q8IU81 584 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 ADSSL1Q8N142 457 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 ACER1Q8TDN7 264 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 ATRIPQ8WXE1 791 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.37
PCDHGA9-202ENST00000616887 hCG_1984214I3L0E3 225 aa12.71□□□□□ -0.38
PCDHGA9-202ENST00000616887 RNF225M0QZC1 329 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA9-202ENST00000616887 MNAT1P51948 309 aa12.71□□□□□ -0.38
PCDHGA9-202ENST00000616887 RBL2Q08999 1139 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms