RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 QRICH1Q2TAL8 776 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 MTERF2Q49AM1 385 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 SPECC1LQ69YQ0 1117 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 ABI1Q8IZP0 508 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 DHTKD1Q96HY7 919 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM207AQ9NSI2 230 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 CTTNBP2NLQ9P2B4 639 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 CD2BP2O95400 341 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 MTMR1Q13613 665 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 GJA10Q969M2 543 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 PCDHB6Q9Y5E3 794 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 FCER1AP12319 257 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 HMGCS2P54868 508 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 MMP19Q99542 508 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 LRMPQ12912 555 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ALCAMQ13740 583 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF827Q17R98 1081 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 RRAGAQ7L523 313 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ADGRF4Q8IZF3 695 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 MTMR4Q9NYA4 1195 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 KRT76Q01546 638 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 NEDD9Q14511 834 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC127Q96BQ5 260 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 MIS12Q9H081 205 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 BARHL2Q9NY43 387 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 TLR3O15455 904 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ARHGAP6O43182 974 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 PLA2G4BP0C869 781 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 NLRC4Q9NPP4 1024 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 MEIS1O00470 390 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ERCC5P28715 1186 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 PSMD2Q13200 908 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 SNAPC2Q13487 334 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 COG2Q14746 738 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 C16orf86Q6ZW13 317 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 PPP1R9BQ96SB3 815 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 MXD3Q9BW11 206 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 PARVGQ9HBI0 331 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 CD2APQ9Y5K6 639 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 NWD1Q149M9 1564 aa10.38□□□□□ -0.75
CLTCL1-208ENST00000615606 WDR64B1ANS9 1081 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 DAPK3O43293 454 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 GNAT1P11488 350 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 CBX1P83916 185 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 MTMR2Q13614 643 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 TTLL4Q14679 1199 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 NEK9Q8TD19 979 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 TCP11Q8WWU5 503 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 CPVLQ9H3G5 476 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 LRFN2Q9ULH4 789 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 HSF2BPO75031 334 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 PPP4CP60510 307 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 ARHGAP4P98171 946 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 CAPZA3Q96KX2 299 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 HESX1Q9UBX0 185 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 ASB14A6NK59 587 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 PPP1R7Q15435 360 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 MFSD14CQ5VZR4 134 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 USP17L6PQ6QN14 398 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 SYCE1Q8N0S2 351 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 MED10Q9BTT4 135 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 SPZ1Q9BXG8 430 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 POLRMTO00411 1230 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 PLCG1P19174 1290 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 PSMC2P35998 433 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 PRELPP51888 382 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 MCM6Q14566 821 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 OTUD6BQ8N6M0 293 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 SECISBP2LQ93073 1101 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 XPO4Q9C0E2 1151 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 DEFB129Q9H1M3 183 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 NUB1Q9Y5A7 615 aa10.37□□□□□ -0.75
CLTCL1-208ENST00000615606 NR2F2P24468 414 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 OR8K1Q8NGG5 319 aa10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC114Q96M63 670 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms