RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 RILPL1Q5EBL4 403 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 CRYGNQ8WXF5 182 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 MPHOSPH6Q99547 160 aaKnown RBP10.36□□□□□ -0.75
MMP28-205ENST00000615317 MAF1Q9H063 256 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
MMP28-205ENST00000615317 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
MMP28-205ENST00000615317 RTEL1Q9NZ71 1219 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
MMP28-205ENST00000615317 PCDHB6Q9Y5E3 794 aa10.36□□□□□ -0.75
MMP28-205ENST00000615317 SYNGAP1Q96PV0 1343 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 ASB14A6NK59 587 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 FIBPO43427 364 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 EDIL3O43854 480 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 NEMFO60524 1076 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 HOXC6P09630 235 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 CYP2C19P33261 490 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 ZNF76P36508 570 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 CTCFP49711 727 aaPredicted RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 SETQ01105 290 aaPredicted RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 PRR16Q569H4 304 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 RAET1EQ8TD07 263 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 USP28Q96RU2 1077 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 TINF2Q9BSI4 451 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 DDX25Q9UHL0 483 aaKnown RBP10.35□□□□□ -0.75
MMP28-205ENST00000615317 PTCH2Q9Y6C5 1203 aa10.35□□□□□ -0.75
MMP28-205ENST00000615317 IGLV3-22A0A075B6J6 115 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 SORBS3O60504 671 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 RGS20O76081 388 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 GNRH1P01148 92 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 GCFC2P16383 781 aaKnown RBP10.34□□□□□ -0.75
MMP28-205ENST00000615317 ITGB5P18084 799 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 HOXD10P28358 340 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 TRAPPC10P48553 1259 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 TRIM32Q13049 653 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 MTMR1Q13613 665 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 ZNF174Q15697 407 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 STXBP2Q15833 593 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
MMP28-205ENST00000615317 GJA10Q969M2 543 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 LENG9Q96B70 501 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
MMP28-205ENST00000615317 IWS1Q96ST2 819 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 CNPY2Q9Y2B0 182 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 DIS3Q9Y2L1 958 aaKnown RBP10.34□□□□□ -0.75
MMP28-205ENST00000615317 CLIC4Q9Y696 253 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 MRVI1Q9Y6F6 885 aa10.34□□□□□ -0.75
MMP28-205ENST00000615317 LOXHD1Q8IVV2 1947 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 B4DLN1 442 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 DDX39AO00148 427 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 ADCY3O60266 1144 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 SNAI1O95863 264 aaPredicted RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 HMGCRP04035 888 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 CYP3A4P08684 503 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 OR52Z1P0C646 297 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 UBA1P22314 1058 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 PTGS1P23219 599 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 CIITAP33076 1130 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 KRT85P78386 507 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 IRF5Q13568 498 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 ARHGEF6Q15052 776 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 CALCRLQ16602 461 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 GNPTABQ3T906 1256 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 ANO1Q5XXA6 986 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 XRRA1Q6P2D8 792 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 MOXD1Q6UVY6 613 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 MAMDC4Q6UXC1 1216 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 VSIG10LQ86VR7 867 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 MORC4Q8TE76 937 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 ZNF396Q96N95 335 aaPredicted RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 INPP4AQ96PE3 977 aaPredicted RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 MXRA8Q9BRK3 442 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 WDR11Q9BZH6 1224 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 KATNBL1Q9H079 304 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 VTA1Q9NP79 307 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
MMP28-205ENST00000615317 ATP6V1DQ9Y5K8 247 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
MMP28-205ENST00000615317 MYH9P35579 1960 aaKnown RBP10.32□□□□□ -0.76
MMP28-205ENST00000615317 ARIH2O95376 493 aa10.32□□□□□ -0.76
MMP28-205ENST00000615317 INHAP05111 366 aa10.32□□□□□ -0.76
MMP28-205ENST00000615317 ARP10275 920 aa10.32□□□□□ -0.76
MMP28-205ENST00000615317 XRCC5P13010 732 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms