RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SMC1AQ14683 1233 aaKnown RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 SNRNP27Q8WVK2 155 aaKnown RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 TCP11Q8WWU5 503 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PHKBQ93100 1093 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 RRP36Q96EU6 259 aaKnown RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 ZMYND12Q9H0C1 365 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PTPRFP10586 1907 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 CYTH3O43739 400 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 EGFRP00533 1210 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 VCAM1P19320 739 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 UBE2HP62256 183 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 NPY5RQ15761 445 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 SLC35G1Q2M3R5 365 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PREPLQ4J6C6 727 aaPredicted RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 FOXR1Q6PIV2 292 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PNMA8AQ86V59 439 aaPredicted RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 FAM160B2Q86V87 743 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 STK11IPQ8N1F8 1099 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 STK24Q9Y6E0 443 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PNMA6FA0A0J9YX94 578 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 GH2P01242 217 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 FAM200BP0CF97 657 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 RXRAP19793 462 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 SEPT2Q15019 361 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 TBC1D10BQ4KMP7 808 aaPredicted RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 RILPL1Q5EBL4 403 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 SFMBT2Q5VUG0 894 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 ARMC9Q7Z3E5 817 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 SCYL3Q8IZE3 742 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 B4GALNT2Q8NHY0 566 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 TSGA10Q9BZW7 698 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 RLFQ13129 1914 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 STXBP3O00186 592 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 CHUKO15111 745 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 PPP6R2O75170 966 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 KRT2P35908 639 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 FLT3P36888 993 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 EPS15P42566 896 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 GHRHRQ02643 423 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 SFSWAPQ12872 951 aaKnown RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 TPD52L1Q16890 204 aaPredicted RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 NOSTRINQ8IVI9 506 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 STAG2Q8N3U4 1231 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 VCPKMTQ9H867 229 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 FAM237AA0A1B0GTK4 181 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 KIF5CO60282 957 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 USP14P54578 494 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 PSMC1P62191 440 aaKnown RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 SLC7A5Q01650 507 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 IQCB1Q15051 598 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 ANGEL2Q5VTE6 544 aaKnown RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 SLFN13Q68D06 897 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 BICD2Q8TD16 824 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 PCDHA4Q9UN74 947 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 RABL2BQ9UNT1 228 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 A0A1W2PQ27 194 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 A0A1W2PQ64 194 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 A0A1W2PQD8 194 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 JAG1P78504 1218 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 E2F5Q15329 346 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 SH3D19Q5HYK7 790 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 KCNG4Q8TDN1 519 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 MMADHCQ9H3L0 296 aaPredicted RBP9.8□□□□□ -0.84
VPS11-206ENST00000614944 SPATA7Q9P0W8 599 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 FEM1BQ9UK73 627 aa9.8□□□□□ -0.84
VPS11-206ENST00000614944 MYPNQ86TC9 1320 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 C19orf81C9J6K1 198 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 F5H6K3 240 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 DDNO94850 711 aaPredicted RBP9.79□□□□□ -0.84
VPS11-206ENST00000614944 CCDC175P0C221 793 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 SESN3P58005 492 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 KLRC3Q07444 240 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 FBXW10Q5XX13 1052 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 USP48Q86UV5 1035 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 CCDC144CPQ8IYA2 1237 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 KLRG1Q96E93 195 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 MYO6Q9UM54 1294 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 ZBTB5O15062 677 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 WDR46O15213 610 aaKnown RBP9.79□□□□□ -0.84
VPS11-206ENST00000614944 FILIP1LQ4L180 1135 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 WDR78Q5VTH9 848 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 PIAS4Q8N2W9 510 aaPredicted RBP9.79□□□□□ -0.84
VPS11-206ENST00000614944 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS11-206ENST00000614944 LEO1Q8WVC0 666 aaPredicted RBP9.79□□□□□ -0.84
VPS11-206ENST00000614944 CABS1Q96KC9 395 aa9.79□□□□□ -0.84
VPS11-206ENST00000614944 SEC63Q9UGP8 760 aaKnown RBP9.79□□□□□ -0.84
VPS11-206ENST00000614944 NDUFB10O96000 172 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 BMP3P12645 472 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 GNA11P29992 359 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms