RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 TAF6LQ9Y6J9 622 aa25.2■■□□□ 1.63
CBWD1-223ENST00000613988 SCN10AQ9Y5Y9 1956 aa25.2■■□□□ 1.62
CBWD1-223ENST00000613988 OPLAHO14841 1288 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 NR3C2P08235 984 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 PBX2P40425 430 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 HSD17B4P51659 736 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 CHMP4BP1P59074 171 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 MAP4K1Q92918 833 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 USP26Q9BXU7 913 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 SENP2Q9HC62 589 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 MAP3K20Q9NYL2 800 aaKnown RBP25.19■■□□□ 1.62
CBWD1-223ENST00000613988 CXXC1Q9P0U4 656 aaPredicted RBP25.19■■□□□ 1.62
CBWD1-223ENST00000613988 KIAA1217Q5T5P2 1943 aa25.19■■□□□ 1.62
CBWD1-223ENST00000613988 PTPN11Q06124 597 aaPredicted RBP25.18■■□□□ 1.62
CBWD1-223ENST00000613988 ARHGAP1Q07960 439 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 TRAF1Q13077 416 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 TMEM67Q5HYA8 995 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 STOX1Q6ZVD7 989 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 PIGSQ96S52 555 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 RIOX1Q9H6W3 641 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 MMP3P08254 477 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 GHRHRQ02643 423 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 CATIPQ7Z7H3 387 aa25.18■■□□□ 1.62
CBWD1-223ENST00000613988 DDX41Q9UJV9 622 aaKnown RBP25.18■■□□□ 1.62
CBWD1-223ENST00000613988 BAZ2BQ9UIF8 2168 aaKnown RBP25.17■■□□□ 1.62
CBWD1-223ENST00000613988 TROAPQ12815 778 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 SLC35G1Q2M3R5 365 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 SAMD3Q8N6K7 520 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 MSRAQ9UJ68 235 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 NOD1Q9Y239 953 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 RBM8AQ9Y5S9 174 aaKnown RBP25.17■■□□□ 1.62
CBWD1-223ENST00000613988 MRVI1Q9Y6F6 885 aa25.17■■□□□ 1.62
CBWD1-223ENST00000613988 CUL9Q8IWT3 2517 aa25.16■■□□□ 1.62
CBWD1-223ENST00000613988 MYCLP12524 364 aaPredicted RBP25.16■■□□□ 1.62
CBWD1-223ENST00000613988 CASTP20810 708 aaKnown RBP25.16■■□□□ 1.62
CBWD1-223ENST00000613988 HOXA13P31271 388 aaPredicted RBP25.16■■□□□ 1.62
CBWD1-223ENST00000613988 RAB30Q15771 203 aa25.16■■□□□ 1.62
CBWD1-223ENST00000613988 CYTH3O43739 400 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 DGKDQ16760 1214 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 DEFB128Q7Z7B8 93 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 RETREG2Q8NC44 543 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 IGDCC4Q8TDY8 1250 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 PDCD2LQ9BRP1 358 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 SLC4A7Q9Y6M7 1214 aa25.15■■□□□ 1.62
CBWD1-223ENST00000613988 PRUNE2Q8WUY3 3088 aa25.14■■□□□ 1.62
CBWD1-223ENST00000613988 PNMA6FA0A0J9YX94 578 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 ZBBXA8MT70 800 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 GCOM1H8Y6P7 765 aaPredicted RBP25.14■■□□□ 1.61
CBWD1-223ENST00000613988 PFKMP08237 780 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 POLR2MP0CAP2 368 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 ANTXR2P58335 489 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 LAMC2Q13753 1193 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 MB21D2Q8IYB1 491 aaPredicted RBP25.14■■□□□ 1.61
CBWD1-223ENST00000613988 EMID1Q96A84 441 aaPredicted RBP25.14■■□□□ 1.61
CBWD1-223ENST00000613988 VWCEQ96DN2 955 aa25.14■■□□□ 1.61
CBWD1-223ENST00000613988 PITPNM1O00562 1244 aa25.13■■□□□ 1.61
CBWD1-223ENST00000613988 BFSP2Q13515 415 aa25.13■■□□□ 1.61
CBWD1-223ENST00000613988 PTGISQ16647 500 aa25.13■■□□□ 1.61
CBWD1-223ENST00000613988 VSIG10LQ86VR7 867 aa25.13■■□□□ 1.61
CBWD1-223ENST00000613988 DHX37Q8IY37 1157 aaKnown RBP25.13■■□□□ 1.61
CBWD1-223ENST00000613988 ANO2Q9NQ90 1003 aa25.13■■□□□ 1.61
CBWD1-223ENST00000613988 IQCF3P0C7M6 154 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 RFC2P35250 354 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 PGM5Q15124 567 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 KCNV1Q6PIU1 500 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 FCHSD1Q86WN1 690 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 PIBF1Q8WXW3 757 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 KAT2BQ92831 832 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 CHD9Q3L8U1 2897 aa25.12■■□□□ 1.61
CBWD1-223ENST00000613988 MYH7BA7E2Y1 1941 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 SESTD1Q86VW0 696 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 PPTC7Q8NI37 304 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 NKX2-4Q9H2Z4 354 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 SLC28A3Q9HAS3 691 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 LY9Q9HBG7 655 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 SCN5AQ14524 2016 aa25.11■■□□□ 1.61
CBWD1-223ENST00000613988 MYO9BQ13459 2157 aa25.1■■□□□ 1.61
CBWD1-223ENST00000613988 RGS20O76081 388 aa25.1■■□□□ 1.61
CBWD1-223ENST00000613988 ACTN1P12814 892 aa25.1■■□□□ 1.61
CBWD1-223ENST00000613988 CCND2P30279 289 aa25.1■■□□□ 1.61
CBWD1-223ENST00000613988 GDF6Q6KF10 455 aaPredicted RBP25.1■■□□□ 1.61
CBWD1-223ENST00000613988 CTCFLQ8NI51 663 aaPredicted RBP25.1■■□□□ 1.61
CBWD1-223ENST00000613988 GAS2L1Q99501 681 aaPredicted RBP25.1■■□□□ 1.61
CBWD1-223ENST00000613988 MAP3K14Q99558 947 aa25.1■■□□□ 1.61
CBWD1-223ENST00000613988 PRC1O43663 620 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 KIF5BP33176 963 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 RABGGTBP53611 331 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 ZNF654Q8IZM8 581 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 CCDC155Q8N6L0 562 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 C7orf31Q8N865 590 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 IL31RAQ8NI17 732 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 ZFP91Q96JP5 570 aaPredicted RBP25.09■■□□□ 1.61
CBWD1-223ENST00000613988 ALG1Q9BT22 464 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 MTA3Q9BTC8 594 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 MYL10Q9BUA6 226 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 KATNAL1Q9BW62 490 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 FTOQ9C0B1 505 aaKnown RBP eCLIP25.09■■□□□ 1.61
CBWD1-223ENST00000613988 LSG1Q9H089 658 aaKnown RBP25.09■■□□□ 1.61
CBWD1-223ENST00000613988 PRDM12Q9H4Q4 367 aa25.09■■□□□ 1.61
CBWD1-223ENST00000613988 YBX2Q9Y2T7 364 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms