RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 WDR37Q9Y2I8 494 aa7.45□□□□□ -1.22
CDKAL1-204ENST00000613575 PCDHB11Q9Y5F2 797 aa7.45□□□□□ -1.22
CDKAL1-204ENST00000613575 AKAP11Q9UKA4 1901 aa7.45□□□□□ -1.22
CDKAL1-204ENST00000613575 POTECB2RU33 542 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SH3BP5O60239 455 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 WDHD1O75717 1129 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 MBD4O95243 580 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PCP11498 1178 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 KCNA2P16389 499 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 IARSP41252 1262 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ZBED6P86452 979 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 HDLBPQ00341 1268 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CHRNDQ07001 517 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SMC1AQ14683 1233 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 E2F5Q15329 346 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 MFSD6Q6ZSS7 791 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 C11orf57Q6ZUT1 292 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 RNF168Q8IYW5 571 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 HPS1Q92902 700 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 DHRS1Q96LJ7 313 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TSGA10Q9BZW7 698 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 NAPBQ9H115 298 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 RNF41Q9H4P4 317 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SENP2Q9HC62 589 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ZNF215Q9UL58 517 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ZNF652Q9Y2D9 606 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SLC12A7Q9Y666 1083 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 NWD2Q9ULI1 1742 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 A0A1B0GVL5 298 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SNAP23O00161 211 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 IFIT3O14879 490 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 RANBP6O60518 1105 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 FESP07332 822 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 EZRP15311 586 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PTGS1P23219 599 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 NLRP12P59046 1061 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SSRP1Q08945 709 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 DHX8Q14562 1220 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 POSTNQ15063 836 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 KIAA0753Q2KHM9 967 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 SLC4A8Q2Y0W8 1093 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TBC1D10BQ4KMP7 808 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ARMC3Q5W041 872 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 FBXO33Q7Z6M2 555 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CATIPQ7Z7H3 387 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 VPS37DQ86XT2 251 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CCDC50Q8IVM0 306 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 LRRC8AQ8IWT6 810 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CEP57L1Q8IYX8 460 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PHTF2Q8N3S3 785 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 CRACR2BQ8N4Y2 399 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 MORC4Q8TE76 937 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 RUFY1Q96T51 708 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 RIOK1Q9BRS2 568 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TRIM4Q9C037 500 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 OSBPL5Q9H0X9 879 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 FOXP1Q9H334 677 aaPredicted RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ARMT1Q9H993 441 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 TMPRSS4Q9NRS4 437 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 GJB4Q9NTQ9 266 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PGPEP1Q9NXJ5 209 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 IMPACTQ9P2X3 320 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PUF60Q9UHX1 559 aaKnown RBP7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 ITM2BQ9Y287 266 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 MRFAP1Q9Y605 127 aa7.44□□□□□ -1.22
CDKAL1-204ENST00000613575 PDS5AQ29RF7 1337 aaKnown RBP7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 ITGB4P16144 1822 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 GOLGA6L9A6NEM1 432 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 BECN2A8MW95 431 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 IKBKBO14920 756 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 PRKAB2O43741 272 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 MYO1BO43795 1136 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 CEP104O60308 925 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 CUTAO60888 179 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 PPFIA3O75145 1194 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 TUBB4AP04350 444 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SLC3A2P08195 630 aaKnown RBP7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 CYP11B2P19099 503 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 NT5C2P49902 561 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SLC7A5Q01650 507 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SNX1Q13596 522 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 KRT72Q14CN4 511 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 NCAPHQ15003 741 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SEC23AQ15436 765 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 TPD52L1Q16890 204 aaPredicted RBP7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 RESP18Q5W5W9 173 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SHC4Q6S5L8 630 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 LCORLQ8N3X6 602 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 ARL10Q8N8L6 244 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 MAB21L3Q8N8X9 362 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 SPC24Q8NBT2 197 aa7.43□□□□□ -1.22
CDKAL1-204ENST00000613575 PLPP7Q8NBV4 271 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms