RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 ATP2C2O75185 946 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 PALMO75781 387 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 FTCDO95954 541 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 SCG2P13521 617 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 PUM3Q15397 648 aaKnown RBP18.29■□□□□ 0.52
TSKU-205ENST00000612930 VWA3BQ502W6 1294 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 TBC1D22AQ8WUA7 517 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 RAPGEF5Q92565 580 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 TMEM60Q9H2L4 133 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 MMRN2Q9H8L6 949 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 GRID2IPA4D2P6 1211 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 ZNF844Q08AG5 666 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 LRCH2Q5VUJ6 765 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 DTHD1Q6ZMT9 781 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 NDST4Q9H3R1 872 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 TAF1DQ9H5J8 278 aaPredicted RBP18.29■□□□□ 0.52
TSKU-205ENST00000612930 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
TSKU-205ENST00000612930 CACNA2D3Q8IZS8 1091 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 CCT6BQ92526 530 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 SEMA6BQ9H3T3 888 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 PACSIN2Q9UNF0 486 aaPredicted RBP18.28■□□□□ 0.52
TSKU-205ENST00000612930 SLC8A1P32418 973 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 UBA7P41226 1012 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 TATDN2Q93075 761 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 ISCUQ9H1K1 167 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 COL18A1P39060 1754 aa18.28■□□□□ 0.52
TSKU-205ENST00000612930 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
TSKU-205ENST00000612930 DNAJC8O75937 253 aaPredicted RBP18.27■□□□□ 0.52
TSKU-205ENST00000612930 RPSAP08865 295 aaKnown RBP18.27■□□□□ 0.52
TSKU-205ENST00000612930 IFFO1Q0D2I5 559 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 ACCSLQ4AC99 568 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 ADGRA1Q86SQ6 560 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 KLHL7Q8IXQ5 586 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 HPS3Q969F9 1004 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 HVCN1Q96D96 273 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 PLCH1Q4KWH8 1693 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 A0A1B0GUA9 196 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 PAEPP09466 180 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 CALM1P0DP23 149 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 CALM2P0DP24 149 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 CALM3P0DP25 149 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 ERCC3P19447 782 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 PFKFB3Q16875 520 aaPredicted RBP18.27■□□□□ 0.52
TSKU-205ENST00000612930 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 TRIM9Q9C026 710 aa18.27■□□□□ 0.52
TSKU-205ENST00000612930 DUOX1Q9NRD9 1551 aa18.27■□□□□ 0.51
TSKU-205ENST00000612930 PPP2R2AP63151 447 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 ELF3P78545 371 aaPredicted RBP18.26■□□□□ 0.51
TSKU-205ENST00000612930 HLTFQ14527 1009 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSKU-205ENST00000612930 MEI1Q5TIA1 1274 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 PDXDC1Q6P996 788 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
TSKU-205ENST00000612930 TMEM59LQ9UK28 342 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 DDAH1O94760 285 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 BIRC3Q13489 604 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 USP38Q8NB14 1042 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 KIAA0895Q8NCT3 520 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 NEUROG2Q9H2A3 272 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSKU-205ENST00000612930 MYH3P11055 1940 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 DLEC1Q9Y238 1755 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 SSU72P8A0A1W2PR75 194 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 DCDC2CA8MYV0 355 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 ATP6V1G2O95670 118 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 NAIF1Q69YI7 327 aaPredicted RBP18.26■□□□□ 0.51
TSKU-205ENST00000612930 DDX42Q86XP3 938 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSKU-205ENST00000612930 FMNL3Q8IVF7 1028 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 BLIDQ8IZY5 108 aa18.26■□□□□ 0.51
TSKU-205ENST00000612930 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
TSKU-205ENST00000612930 PPIP5K2O43314 1243 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 GHRP10912 638 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 PLCG1P19174 1290 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 DRD4P21917 467 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 KLRC1P26715 233 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 CTNNA1P35221 906 aaKnown RBP18.25■□□□□ 0.51
TSKU-205ENST00000612930 EHHADHQ08426 723 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 HLFQ16534 295 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.25■□□□□ 0.51
TSKU-205ENST00000612930 KDM4CQ9H3R0 1056 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 NOD2Q9HC29 1040 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 NOVA2Q9UNW9 492 aaKnown RBP18.25■□□□□ 0.51
TSKU-205ENST00000612930 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
TSKU-205ENST00000612930 IRS4O14654 1257 aaPredicted RBP18.25■□□□□ 0.51
TSKU-205ENST00000612930 TNNC1P63316 161 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 ASIC1P78348 528 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 NAB2Q15742 525 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
TSKU-205ENST00000612930 FLT1P17948 1338 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms