RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SPA17Q15506 151 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 CCDC96Q2M329 555 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 KCTD1Q719H9 257 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 GUF1Q8N442 669 aaKnown RBP19.16■□□□□ 0.66
NEK3-206ENST00000611833 CUL5Q93034 780 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 LACRTQ9GZZ8 138 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 NDST4Q9H3R1 872 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 MYH4Q9Y623 1939 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 MPHOSPH10O00566 681 aaKnown RBP19.16■□□□□ 0.66
NEK3-206ENST00000611833 CDK17Q00537 523 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 CYP27A1Q02318 531 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 PPP4R3AQ6IN85 833 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 KCNK18Q7Z418 384 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 DDX12PQ92771 950 aa19.16■□□□□ 0.66
NEK3-206ENST00000611833 DDX25Q9UHL0 483 aaKnown RBP19.16■□□□□ 0.66
NEK3-206ENST00000611833 RCCD1A6NED2 376 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 USP17L10C9JJH3 530 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 SRGAP2O75044 1071 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 MRPL12P52815 198 aaKnown RBP19.15■□□□□ 0.66
NEK3-206ENST00000611833 KIF5AQ12840 1032 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 PAPD7Q5XG87 772 aaKnown RBP19.15■□□□□ 0.66
NEK3-206ENST00000611833 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 TEKT1Q969V4 418 aa19.15■□□□□ 0.66
NEK3-206ENST00000611833 FAM207AQ9NSI2 230 aaPredicted RBP19.15■□□□□ 0.66
NEK3-206ENST00000611833 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.15■□□□□ 0.66
NEK3-206ENST00000611833 LRRC63Q05C16 580 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 MAN2A1Q16706 1144 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 GPATCH4Q5T3I0 446 aaKnown RBP19.14■□□□□ 0.66
NEK3-206ENST00000611833 HAS1Q92839 578 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 TSG101Q99816 390 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 MMRN2Q9H8L6 949 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 L1RE1Q9UN81 338 aa19.14■□□□□ 0.66
NEK3-206ENST00000611833 MYH7BA7E2Y1 1941 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 MACROD2A1Z1Q3 448 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 ZBTB5O15062 677 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 EIF3JO75822 258 aaKnown RBP19.14■□□□□ 0.65
NEK3-206ENST00000611833 HLA-DOAP06340 250 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 NPR1P16066 1061 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 PSMD2Q13200 908 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 ECM1Q16610 540 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 CCDC84Q86UT8 332 aaPredicted RBP19.14■□□□□ 0.65
NEK3-206ENST00000611833 GJA10Q969M2 543 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 MTMR8Q96EF0 704 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 CAPZA3Q96KX2 299 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 TSGA10Q9BZW7 698 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 DNAJC18Q9H819 358 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
NEK3-206ENST00000611833 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.65
NEK3-206ENST00000611833 VAV2P52735 878 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 LRRC41Q15345 812 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 TMEM119Q4V9L6 283 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 MMS19Q96T76 1030 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 SUGCTQ9HAC7 445 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 PDE11AQ9HCR9 933 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 PLAGL2Q9UPG8 496 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 DUSP10Q9Y6W6 482 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 BRWD3Q6RI45 1802 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 PLEKP08567 350 aaPredicted RBP19.13■□□□□ 0.65
NEK3-206ENST00000611833 CKAP4Q07065 602 aaKnown RBP19.13■□□□□ 0.65
NEK3-206ENST00000611833 TAF3Q5VWG9 929 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 CAGE1Q8TC20 777 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 SECISBP2LQ93073 1101 aaKnown RBP19.13■□□□□ 0.65
NEK3-206ENST00000611833 PSTPIP2Q9H939 334 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 KCNQ5Q9NR82 932 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 SIK3Q9Y2K2 1263 aa19.13■□□□□ 0.65
NEK3-206ENST00000611833 ABCB11O95342 1321 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 H3BQF6 201 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 USO1O60763 962 aaKnown RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 KRT27Q7Z3Y8 459 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 DEF6Q9H4E7 631 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 RNF216Q9NWF9 866 aaPredicted RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 PCDHAC2Q9Y5I4 1007 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 FAM196BA6NMK8 535 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 G3V3G9 751 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 RAD21O60216 631 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 SSBP05455 408 aaKnown RBP eCLIP19.12■□□□□ 0.65
NEK3-206ENST00000611833 ERCC3P19447 782 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 CRKP46108 304 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 CACNB3P54284 484 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 EHHADHQ08426 723 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 SHROOM1Q2M3G4 852 aaPredicted RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 DCAF8Q5TAQ9 597 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 WDR93Q6P2C0 686 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 KRT26Q7Z3Y9 468 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 EHD4Q9H223 541 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 JADE2Q9NQC1 790 aa19.12■□□□□ 0.65
NEK3-206ENST00000611833 BMP2KQ9NSY1 1161 aaPredicted RBP19.12■□□□□ 0.65
NEK3-206ENST00000611833 ANO9A1A5B4 782 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 EPHB6O15197 1021 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 ALDH1B1P30837 517 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 HNRNPH3P31942 346 aaKnown RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 USP14P54578 494 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
NEK3-206ENST00000611833 MYOCDQ8IZQ8 938 aa19.11■□□□□ 0.65
NEK3-206ENST00000611833 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms