RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 NFRKBQ6P4R8 1299 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 PDCD2LQ9BRP1 358 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
TOM1-218ENST00000608674 SPZ1Q9BXG8 430 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
TOM1-218ENST00000608674 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 TRMT13Q9NUP7 481 aaKnown RBP15.3■□□□□ 0.04
TOM1-218ENST00000608674 NOD1Q9Y239 953 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 SLC12A7Q9Y666 1083 aa15.3■□□□□ 0.04
TOM1-218ENST00000608674 CDC45O75419 566 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 MMP3P08254 477 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 CASTP20810 708 aaKnown RBP15.29■□□□□ 0.04
TOM1-218ENST00000608674 CCND2P30279 289 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 LIFRP42702 1097 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 DGKDQ16760 1214 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 KCNV1Q6PIU1 500 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 SYNE3Q6ZMZ3 975 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 C16orf59Q7L2K0 433 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 VSIG10LQ86VR7 867 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
TOM1-218ENST00000608674 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 CUL5Q93034 780 aa15.29■□□□□ 0.04
TOM1-218ENST00000608674 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
TOM1-218ENST00000608674 UMODL1Q5DID0 1318 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 FGBP02675 491 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 CYP2C9P11712 490 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 SMARCA1P28370 1054 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 PTPN11Q06124 597 aaPredicted RBP15.28■□□□□ 0.04
TOM1-218ENST00000608674 ARHGAP1Q07960 439 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 PGM5Q15124 567 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
TOM1-218ENST00000608674 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 SEMA6BQ9H3T3 888 aa15.28■□□□□ 0.04
TOM1-218ENST00000608674 MYH6P13533 1939 aa15.27■□□□□ 0.04
TOM1-218ENST00000608674 RXRAP19793 462 aa15.27■□□□□ 0.04
TOM1-218ENST00000608674 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
TOM1-218ENST00000608674 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.04
TOM1-218ENST00000608674 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.04
TOM1-218ENST00000608674 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
TOM1-218ENST00000608674 CUL9Q8IWT3 2517 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 PLEKHA8P1O95397 391 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 TGFB3P10600 412 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 KRT32Q14532 448 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 GNPTABQ3T906 1256 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 RAB11FIP4Q86YS3 637 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
TOM1-218ENST00000608674 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 IL31RAQ8NI17 732 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 PPTC7Q8NI37 304 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 PPP1R13LQ8WUF5 828 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 SCLYQ96I15 445 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 NEK1Q96PY6 1258 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 WNT8AQ9H1J5 351 aa15.26■□□□□ 0.03
TOM1-218ENST00000608674 SORBS3O60504 671 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 RGS20O76081 388 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 GGPS1O95749 300 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 DNAJB2P25686 324 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 BFSP2Q13515 415 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 PTGISQ16647 500 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
TOM1-218ENST00000608674 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 MICU3Q86XE3 530 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 CMTR1Q8N1G2 835 aaKnown RBP15.25■□□□□ 0.03
TOM1-218ENST00000608674 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 C7orf31Q8N865 590 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 ZFP91Q96JP5 570 aaPredicted RBP15.25■□□□□ 0.03
TOM1-218ENST00000608674 CDX2Q99626 313 aaPredicted RBP15.25■□□□□ 0.03
TOM1-218ENST00000608674 KATNAL1Q9BW62 490 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
TOM1-218ENST00000608674 ZBBXA8MT70 800 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 PPFIA4O75335 1185 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 STAM2O75886 525 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 NEFLP07196 543 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 UBA1P22314 1058 aaKnown RBP15.24■□□□□ 0.03
TOM1-218ENST00000608674 PSEN2P49810 448 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 FGD1P98174 961 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
TOM1-218ENST00000608674 RASIP1Q5U651 963 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 MYSM1Q5VVJ2 828 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 USP17L6PQ6QN14 398 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 DHX32Q7L7V1 743 aaKnown RBP15.24■□□□□ 0.03
TOM1-218ENST00000608674 DEFB128Q7Z7B8 93 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 KAT2BQ92831 832 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 TIFAQ96CG3 184 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
TOM1-218ENST00000608674 PSTPIP2Q9H939 334 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 MSRAQ9UJ68 235 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
TOM1-218ENST00000608674 GRXCR1A8MXD5 290 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms