RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
CTSA-219ENST00000607841 XPNPEP3Q9NQH7 507 aa16.31■□□□□ 0.2
CTSA-219ENST00000607841 PDGFCQ9NRA1 345 aa16.31■□□□□ 0.2
CTSA-219ENST00000607841 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
CTSA-219ENST00000607841 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
CTSA-219ENST00000607841 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
CTSA-219ENST00000607841 CENPFP49454 3210 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTSA-219ENST00000607841 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 RNF180Q86T96 592 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 BLIDQ8IZY5 108 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 PHF20Q9BVI0 1012 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 Q9Y3F1 56 aa16.3■□□□□ 0.2
CTSA-219ENST00000607841 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
CTSA-219ENST00000607841 TGFB3P10600 412 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 SMPD1P17405 629 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 SNX21Q969T3 373 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 AP5M1Q9H0R1 490 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
CTSA-219ENST00000607841 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
CTSA-219ENST00000607841 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.28■□□□□ 0.2
CTSA-219ENST00000607841 DTNBO60941 627 aa16.28■□□□□ 0.2
CTSA-219ENST00000607841 SREBF1P36956 1147 aa16.28■□□□□ 0.2
CTSA-219ENST00000607841 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
CTSA-219ENST00000607841 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
CTSA-219ENST00000607841 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
CTSA-219ENST00000607841 INPP4AQ96PE3 977 aaPredicted RBP16.28■□□□□ 0.2
CTSA-219ENST00000607841 RTEL1Q9NZ71 1219 aa16.28■□□□□ 0.2
CTSA-219ENST00000607841 GNEQ9Y223 722 aaKnown RBP16.28■□□□□ 0.2
CTSA-219ENST00000607841 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.2
CTSA-219ENST00000607841 DNM1LO00429 736 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 MAFGO15525 162 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.2
CTSA-219ENST00000607841 FIBPO43427 364 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
CTSA-219ENST00000607841 ICAM3P32942 547 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 KRT2P35908 639 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 ZNF76P36508 570 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 GJA9P57773 515 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 ARHGAP4P98171 946 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTSA-219ENST00000607841 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
CTSA-219ENST00000607841 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 KRT25Q7Z3Z0 450 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 TLK2Q86UE8 772 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
CTSA-219ENST00000607841 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 ADCY6O43306 1168 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 ZEB2O60315 1214 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 ADAMTS4O75173 837 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 RGS20O76081 388 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 FARP2O94887 1054 aaPredicted RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 PGK1P00558 417 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 MMP1P03956 469 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 CYP3A4P08684 503 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 C6orf222P0C671 652 aaPredicted RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 NKX3-2P78367 333 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 CUL4AQ13619 759 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 LRRC41Q15345 812 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 NPY5RQ15761 445 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 KRT40Q6A162 431 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 LENG1Q96BZ8 264 aaPredicted RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 GPRASP2Q96D09 838 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 UPF3AQ9H1J1 476 aaKnown RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
CTSA-219ENST00000607841 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
CTSA-219ENST00000607841 LCTP09848 1927 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 CCDC194A0A1B0GVG4 234 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 M0R2N6 131 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 ADAMTS3O15072 1205 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 GH1P01241 217 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 CST5P28325 142 aaPredicted RBP16.25■□□□□ 0.19
CTSA-219ENST00000607841 RGS19P49795 217 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 CPT1AP50416 773 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 USP11P51784 963 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 MTMR1Q13613 665 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 NEDD9Q14511 834 aa16.25■□□□□ 0.19
CTSA-219ENST00000607841 NONOQ15233 471 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms