RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	RFX6	Q8HWS3	928 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	RTKN2	Q8IZC4	609 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	TTLL6	Q8N841	843 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	MASTL	Q96GX5	879 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	SNX25	Q9H3E2	840 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	OSTN	P61366	133 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	GOLGA8F	Q08AF8	430 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	GOLGA8DP	Q0D2H9	430 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	ANKRD13C	Q8N6S4	541 aa		10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.88	□□□□□ -0.67
PAX6-231	ENST00000606377	XPOT	O43592	962 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	MARK3	P27448	753 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	CASP14	P31944	242 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	GBP1	P32455	592 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	STX2	P32856	288 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	RNASEL	Q05823	741 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	KSR1	Q8IVT5	923 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	UHMK1	Q8TAS1	419 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	NACC1	Q96RE7	527 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ZNF341	Q9BYN7	854 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	PCDHA5	Q9Y5H7	936 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ABCC12	Q96J65	1359 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	AFP	P02771	609 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ATF2	P15336	505 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	CDC25A	P30304	524 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	FAM186B	Q8IYM0	893 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	OSBPL3	Q9H4L5	887 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ZNF148	Q9UQR1	794 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	PPFIA1	Q13136	1202 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	NXN	Q6DKJ4	435 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	BRINP3	Q76B58	766 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	METTL23	Q86XA0	190 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	TTLL11	Q8NHH1	800 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	COA1	Q9GZY4	146 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	RIPOR2	Q9Y4F9	1068 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	CACNB3	P54284	484 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	TFAM	Q00059	246 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ARHGEF6	Q15052	776 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	RPGRIP1	Q96KN7	1286 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	PREX2	Q70Z35	1606 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	LRRN2	O75325	713 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	GCFC2	P16383	781 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ZSCAN20	P17040	1043 aa	Predicted RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	ARPP19	P56211	112 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	PLCB4	Q15147	1175 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	P2RX5	Q93086	422 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	JPH2	Q9BR39	696 aa	Predicted RBP	10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	CHD1	O14646	1710 aa		10.87	□□□□□ -0.67
PAX6-231	ENST00000606377	LMNB1	P20700	586 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	EHHADH	Q08426	723 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	RPS6KA2	Q15349	733 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PPP4R1	Q8TF05	950 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	MAD1L1	Q9Y6D9	718 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377		A0A1W2PQ27	194 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377		A0A1W2PQ64	194 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377		A0A1W2PQD8	194 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	BUB1B	O60566	1050 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	KIF23	Q02241	960 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	TRMT2A	Q8IZ69	625 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CABS1	Q96KC9	395 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	GSDMA	Q96QA5	445 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SETD1B	Q9UPS6	1966 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CACNA2D3	Q8IZS8	1091 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SKA2	Q8WVK7	121 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SLC10A4	Q96EP9	437 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	POLR3E	Q9NVU0	708 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	MAN1B1	Q9UKM7	699 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	MAP3K4	Q9Y6R4	1608 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SASH1	O94885	1247 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PTPRE	P23469	700 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SPATA31E1	Q6ZUB1	1445 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	hCG_1984214	I3L0E3	225 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	SGK1	O00141	431 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PRPF3	O43395	683 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PSAP	P07602	524 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	INPP5B	P32019	993 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	BPIFB4	P59827	614 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	RBL2	Q08999	1139 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PRPSAP1	Q14558	356 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	ANKRD20A3	Q5VUR7	823 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	ZNF713	Q8N859	430 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	RSRC1	Q96IZ7	334 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377		A0A087WWV3	80 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	PNMA6F	A0A0J9YX94	578 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	EIF2AK2	P19525	551 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	MCAM	P43121	646 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	NAA25	Q14CX7	972 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	ZNF710	Q8N1W2	664 aa		10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CACTIN	Q8WUQ7	758 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CACYBP	Q9HB71	228 aa	Known RBP	10.86	□□□□□ -0.67
PAX6-231	ENST00000606377	CDHR1	Q96JP9	859 aa		10.85	□□□□□ -0.67
PAX6-231	ENST00000606377		A6NNZ2	444 aa		10.85	□□□□□ -0.67
PAX6-231	ENST00000606377	SRGAP2C	P0DJJ0	459 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms