RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 H0YHG0 523 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MDH1P40925 334 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 GRM4Q14833 912 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 NLRP14Q86W24 1093 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 CCT8L2Q96SF2 557 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 A1CFQ9NQ94 594 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MAP2K2P36507 400 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 SEC24CP53992 1094 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 WHAMMQ8TF30 809 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 EDEM3Q9BZQ6 932 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 BARHL2Q9NY43 387 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MAD2L2Q9UI95 211 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
LYSMD4-211ENST00000604213 MYH1P12882 1939 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 GRID2IPA4D2P6 1211 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 HMGB1P1B2RPK0 211 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 CYTH3O43739 400 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 HDLBPQ00341 1268 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 ITGB3BPQ13352 177 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 TRADDQ15628 312 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 SBK1Q52WX2 424 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 KRT12Q99456 494 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 CXorf56Q9H5V9 222 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 SRRM3A6NNA2 597 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 PALMO75781 387 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 MECOMQ03112 1051 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 CDC37Q16543 378 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
LYSMD4-211ENST00000604213 NTSR2O95665 410 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 HSPA9P38646 679 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 GNAQP50148 359 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 SETQ01105 290 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 ACTN3Q08043 901 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 NAB2Q15742 525 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 LRRC55Q6ZSA7 311 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 ANKS1AQ92625 1134 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 INPP4AQ96PE3 977 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 MYMKA6NI61 221 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 ZPR1O75312 459 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 ADAMTS2O95450 1211 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 FGFR1OPO95684 399 aaKnown RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 FTCDO95954 541 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 FAM107AO95990 144 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 MYBP10242 640 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 TECP42680 631 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 TFAP4Q01664 338 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 KCNMA1Q12791 1236 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 RNF187Q5TA31 235 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 MEI1Q5TIA1 1274 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 C6orf89Q6UWU4 347 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 FAM84BQ96KN1 310 aaPredicted RBP16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 PLAAQ9Y263 795 aa16.84■□□□□ 0.29
LYSMD4-211ENST00000604213 LAMB1P07942 1786 aa16.83■□□□□ 0.29
LYSMD4-211ENST00000604213 TLR2O60603 784 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 DNA2P51530 1060 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 LETM2Q2VYF4 491 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 CAVIN4Q5BKX8 364 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 UNC13DQ70J99 1090 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 GUF1Q8N442 669 aaKnown RBP16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 TMBIM4Q9HC24 238 aa16.83■□□□□ 0.28
LYSMD4-211ENST00000604213 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 SMTNP53814 917 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 BRINP3Q76B58 766 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 SV2BQ7L1I2 683 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 BLOC1S4Q9NUP1 217 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 PCDHGC5Q9Y5F6 944 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 CASZ1Q86V15 1759 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 RAD51CO43502 376 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 LRRC63Q05C16 580 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 IFT88Q13099 833 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 GRB10Q13322 594 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 CEP85LQ5SZL2 805 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 KRT25Q7Z3Z0 450 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 SYN2Q92777 582 aaPredicted RBP16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 JPH2Q9BR39 696 aaPredicted RBP16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 PLCB1Q9NQ66 1216 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
LYSMD4-211ENST00000604213 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms