RNA–Protein interactions for RNA: ENST00000603546.1

GNAS-256, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-256	ENST00000603546	CUL9	Q8IWT3	2517 aa		31.6	■■■□□ 2.65
GNAS-256	ENST00000603546	BAZ2B	Q9UIF8	2168 aa	Known RBP	31.59	■■■□□ 2.65
GNAS-256	ENST00000603546	IGDCC4	Q8TDY8	1250 aa		31.59	■■■□□ 2.65
GNAS-256	ENST00000603546	PPP1R13L	Q8WUF5	828 aa		31.59	■■■□□ 2.65
GNAS-256	ENST00000603546	EMID1	Q96A84	441 aa	Predicted RBP	31.59	■■■□□ 2.65
GNAS-256	ENST00000603546	PDCD2L	Q9BRP1	358 aa		31.59	■■■□□ 2.65
GNAS-256	ENST00000603546	UNC80	Q8N2C7	3258 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	PITPNM1	O00562	1244 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	CYTH3	O43739	400 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	TMEM67	Q5HYA8	995 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	CATIP	Q7Z7H3	387 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	RETREG2	Q8NC44	543 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	MRVI1	Q9Y6F6	885 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	SLC4A7	Q9Y6M7	1214 aa		31.58	■■■□□ 2.65
GNAS-256	ENST00000603546	PNMA6F	A0A0J9YX94	578 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	RFC2	P35250	354 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	ANTXR2	P58335	489 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	LAMC2	Q13753	1193 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	DGKD	Q16760	1214 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	VSIG10L	Q86VR7	867 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	MB21D2	Q8IYB1	491 aa	Predicted RBP	31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	KAT2B	Q92831	832 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	NOD1	Q9Y239	953 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	RBM8A	Q9Y5S9	174 aa	Known RBP	31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	MYO9B	Q13459	2157 aa		31.57	■■■□□ 2.64
GNAS-256	ENST00000603546	GCOM1	H8Y6P7	765 aa	Predicted RBP	31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	POLR2M	P0CAP2	368 aa		31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	HOXA13	P31271	388 aa	Predicted RBP	31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	CHMP4BP1	P59074	171 aa		31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	BFSP2	Q13515	415 aa		31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	KCNV1	Q6PIU1	500 aa		31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	SESTD1	Q86VW0	696 aa		31.56	■■■□□ 2.64
GNAS-256	ENST00000603546	IQCF3	P0C7M6	154 aa		31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	MYCL	P12524	364 aa	Predicted RBP	31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	PGM5	Q15124	567 aa		31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	DEFB128	Q7Z7B8	93 aa		31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	DHX37	Q8IY37	1157 aa	Known RBP	31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	MAP3K14	Q99558	947 aa		31.55	■■■□□ 2.64
GNAS-256	ENST00000603546	RGS20	O76081	388 aa		31.54	■■■□□ 2.64
GNAS-256	ENST00000603546	PTGIS	Q16647	500 aa		31.54	■■■□□ 2.64
GNAS-256	ENST00000603546	PPTC7	Q8NI37	304 aa		31.54	■■■□□ 2.64
GNAS-256	ENST00000603546	MTA3	Q9BTC8	594 aa		31.54	■■■□□ 2.64
GNAS-256	ENST00000603546	ZBBX	A8MT70	800 aa		31.53	■■■□□ 2.64
GNAS-256	ENST00000603546	SLC28A3	Q9HAS3	691 aa		31.53	■■■□□ 2.64
GNAS-256	ENST00000603546	TGFB3	P10600	412 aa		31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	ACTN1	P12814	892 aa		31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	GAS2L1	Q99501	681 aa	Predicted RBP	31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	NKX2-4	Q9H2Z4	354 aa		31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	YBX2	Q9Y2T7	364 aa	Known RBP	31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	EYS	Q5T1H1	3165 aa		31.52	■■■□□ 2.64
GNAS-256	ENST00000603546	MYH7B	A7E2Y1	1941 aa		31.51	■■■□□ 2.64
GNAS-256	ENST00000603546	PPFIA4	O75335	1185 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	MYSM1	Q5VVJ2	828 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	GDF6	Q6KF10	455 aa	Predicted RBP	31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	FCHSD1	Q86WN1	690 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	CAGE1	Q8TC20	777 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	KATNAL1	Q9BW62	490 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	COL25A1	Q9BXS0	654 aa	Predicted RBP	31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	PRDM12	Q9H4Q4	367 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	LY9	Q9HBG7	655 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	SCN5A	Q14524	2016 aa		31.51	■■■□□ 2.63
GNAS-256	ENST00000603546	ATP2A2	P16615	1042 aa	Known RBP	31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	SMARCA1	P28370	1054 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	CCND2	P30279	289 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	CELF3	Q5SZQ8	465 aa	Known RBP	31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	CASC1	Q6TDU7	716 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	TMTC2	Q8N394	836 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	CCDC155	Q8N6L0	562 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	IL31RA	Q8NI17	732 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	CTAGE1	Q96RT6	745 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	LSG1	Q9H089	658 aa	Known RBP	31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	PCDHA11	Q9Y5I1	949 aa		31.5	■■■□□ 2.63
GNAS-256	ENST00000603546	DDAH1	O94760	285 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	HOXD8	P13378	290 aa	Predicted RBP	31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	PSEN2	P49810	448 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	RABGGTB	P53611	331 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	ZNF654	Q8IZM8	581 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	C7orf31	Q8N865	590 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	CTCFL	Q8NI51	663 aa	Predicted RBP	31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	HDAC6	Q9UBN7	1215 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	GTF2IRD1	Q9UHL9	959 aa		31.49	■■■□□ 2.63
GNAS-256	ENST00000603546	TRIP12	Q14669	1992 aa	Predicted RBP	31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	HAS3	O00219	553 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	PRC1	O43663	620 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	F2	P00734	622 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	KIF5B	P33176	963 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	MCM5	P33992	734 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	AFAP1L1	Q8TED9	768 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	ESYT1	Q9BSJ8	1104 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	SPZ1	Q9BXG8	430 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	FTO	Q9C0B1	505 aa	Known RBP eCLIP	31.48	■■■□□ 2.63	7e-9	■□□□□ 11.2
GNAS-256	ENST00000603546	GBF1	Q92538	1859 aa		31.48	■■■□□ 2.63
GNAS-256	ENST00000603546	PRUNE2	Q8WUY3	3088 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	SP2	Q02086	613 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	MFSD10	Q14728	455 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	PIBF1	Q8WXW3	757 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	TMEM87B	Q96K49	555 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	SPATA33	Q96N06	139 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	LZTS2	Q9BRK4	669 aa		31.47	■■■□□ 2.63
GNAS-256	ENST00000603546	ALG1	Q9BT22	464 aa		31.47	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms