RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 NSUN6Q8TEA1 469 aaKnown RBP25.54■■□□□ 1.68
IRF3-228ENST00000601291 RAB34Q9BZG1 259 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 GZF1Q9H116 711 aaPredicted RBP25.54■■□□□ 1.68
IRF3-228ENST00000601291 HPSEQ9Y251 543 aa25.54■■□□□ 1.68
IRF3-228ENST00000601291 TXLNAP40222 546 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 SETQ01105 290 aaPredicted RBP25.53■■□□□ 1.68
IRF3-228ENST00000601291 CEP55Q53EZ4 464 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 XRRA1Q6P2D8 792 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 IFNL1Q8IU54 200 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 FMR1NBQ8N0W7 255 aaPredicted RBP25.53■■□□□ 1.68
IRF3-228ENST00000601291 AK8Q96MA6 479 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 PDCD2LQ9BRP1 358 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 KCNMB3Q9NPA1 279 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 CREBZFQ9NS37 354 aa25.53■■□□□ 1.68
IRF3-228ENST00000601291 SYKP43405 635 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 FXR2P51116 673 aaKnown RBP eCLIP25.52■■□□□ 1.68
IRF3-228ENST00000601291 SNW1Q13573 536 aaKnown RBP25.52■■□□□ 1.68
IRF3-228ENST00000601291 KCTD2Q14681 263 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 TAF1CQ15572 869 aaPredicted RBP25.52■■□□□ 1.68
IRF3-228ENST00000601291 FAM110CQ1W6H9 321 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 WDR78Q5VTH9 848 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 DNERQ8NFT8 737 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 SYMPKQ92797 1274 aaKnown RBP25.52■■□□□ 1.68
IRF3-228ENST00000601291 NUP62CLQ9H1M0 184 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 KCNH3Q9ULD8 1083 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 IGLV3-22A0A075B6J6 115 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 APLP1P51693 650 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 GRM1Q13255 1194 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 PLA2G4DQ86XP0 818 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 HAS1Q92839 578 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 LENG9Q96B70 501 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 FAM20AQ96MK3 541 aa25.52■■□□□ 1.68
IRF3-228ENST00000601291 POTEB2H3BUK9 544 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 CCND2P30279 289 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 TECP42680 631 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 NIPA1Q7RTP0 329 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 IL31RAQ8NI17 732 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 ETNPPLQ8TBG4 499 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 PURBQ96QR8 312 aaKnown RBP25.51■■□□□ 1.67
IRF3-228ENST00000601291 MMP19Q99542 508 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 MXRA8Q9BRK3 442 aa25.51■■□□□ 1.67
IRF3-228ENST00000601291 TTC12Q9H892 705 aaPredicted RBP25.51■■□□□ 1.67
IRF3-228ENST00000601291 FCER1AP12319 257 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 NOGQ13253 232 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 CYP4F22Q6NT55 531 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 EPSTI1Q96J88 318 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 CLSTN2Q9H4D0 955 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 ADD3Q9UEY8 706 aaKnown RBP25.5■■□□□ 1.67
IRF3-228ENST00000601291 PCDHA12Q9UN75 941 aa25.5■■□□□ 1.67
IRF3-228ENST00000601291 RASSF10A6NK89 507 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 ZNF202O95125 648 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 MYCLP12524 364 aaPredicted RBP25.49■■□□□ 1.67
IRF3-228ENST00000601291 DEFB115Q30KQ5 88 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 IGSF22Q8N9C0 903 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 CYP2W1Q8TAV3 490 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 PYM1Q9BRP8 204 aaKnown RBP25.49■■□□□ 1.67
IRF3-228ENST00000601291 PORCNQ9H237 461 aa25.49■■□□□ 1.67
IRF3-228ENST00000601291 MEIS1O00470 390 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 MSH4O15457 936 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 LETM1O95202 739 aaPredicted RBP25.48■■□□□ 1.67
IRF3-228ENST00000601291 NR3C2P08235 984 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 BCRP11274 1271 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 TM4SF4P48230 202 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 PDIA5Q14554 519 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 ZSCAN23Q3MJ62 389 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 USP49Q70CQ1 688 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 IWS1Q96ST2 819 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 EFCC1Q9HA90 598 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 LRWD1Q9UFC0 647 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 UBIAD1Q9Y5Z9 338 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 ADGRA2Q96PE1 1338 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 UBA7P41226 1012 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 MRPS9P82933 396 aaKnown RBP25.48■■□□□ 1.67
IRF3-228ENST00000601291 TIGD1Q96MW7 591 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 MPHOSPH6Q99547 160 aaKnown RBP25.48■■□□□ 1.67
IRF3-228ENST00000601291 TNMDQ9H2S6 317 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 ZFYVE28Q9HCC9 887 aa25.48■■□□□ 1.67
IRF3-228ENST00000601291 B4DLN1 442 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 STAM2O75886 525 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 ITGB5P18084 799 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 CNTN2Q02246 1040 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 VSIG10LQ86VR7 867 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 FAM133AQ8N9E0 248 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 JADE2Q9NQC1 790 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 IVNS1ABPQ9Y6Y0 642 aa25.47■■□□□ 1.67
IRF3-228ENST00000601291 CTAGE5O15320 804 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 ALDH5A1P51649 535 aaPredicted RBP25.46■■□□□ 1.67
IRF3-228ENST00000601291 RASSF8Q8NHQ8 419 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 ZFP91Q96JP5 570 aaPredicted RBP25.46■■□□□ 1.67
IRF3-228ENST00000601291 ZNF577Q9BSK1 485 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 CCSER1Q9C0I3 900 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 R3HDMLQ9H3Y0 253 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 CCDC39Q9UFE4 941 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 CPA4Q9UI42 421 aa25.46■■□□□ 1.67
IRF3-228ENST00000601291 POLR2DO15514 142 aaKnown RBP25.45■■□□□ 1.66
IRF3-228ENST00000601291 STRNO43815 780 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 MAPK4P31152 587 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 MTMR1Q13613 665 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 CAMK4Q16566 473 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 NLRX1Q86UT6 975 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms