RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 AMNQ9BXJ7 453 aa20.97■□□□□ 0.95
CHMP2A-208ENST00000601220 KLRF2D3W0D1 207 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 DHX16O60231 1041 aaKnown RBP20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 PTGISQ16647 500 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 TTC22Q5TAA0 569 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 PPP2R2DQ66LE6 453 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 STOX1Q6ZVD7 989 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 RETREG2Q8NC44 543 aa20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 DHX38Q92620 1227 aaKnown RBP20.96■□□□□ 0.95
CHMP2A-208ENST00000601220 MUC3AQ02505 3323 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 ZBTB5O15062 677 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 CFBP00751 764 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 IGFBP4P22692 258 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 PTH1RQ03431 593 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 BFSP2Q13515 415 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 CCDC85BQ15834 202 aaPredicted RBP20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 CHST3Q7LGC8 479 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 PHOSPHO2Q8TCD6 241 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 ATXN2LQ8WWM7 1075 aaKnown RBP20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 PDCD2LQ9BRP1 358 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
CHMP2A-208ENST00000601220 HAS3O00219 553 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 ARHGEF15O94989 841 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 CYP21A2P08686 494 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 ACTN1P12814 892 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 HOXD8P13378 290 aaPredicted RBP20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 RBL2Q08999 1139 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 DGKDQ16760 1214 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 TMEM67Q5HYA8 995 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 VSIG10LQ86VR7 867 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 CAGE1Q8TC20 777 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 RIOX1Q9H6W3 641 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 MAP3K20Q9NYL2 800 aaKnown RBP20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 GTF2IRD1Q9UHL9 959 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 TAF6LQ9Y6J9 622 aa20.94■□□□□ 0.94
CHMP2A-208ENST00000601220 GBF1Q92538 1859 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 CA3P07451 260 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 CHMLP26374 656 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 CHMP4BP1P59074 171 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 LAMC2Q13753 1193 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 GRM4Q14833 912 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 PPTC7Q8NI37 304 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 AFAP1L1Q8TED9 768 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 ASB2Q96Q27 587 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 SLC9A7Q96T83 725 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 HDAC6Q9UBN7 1215 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 NOD1Q9Y239 953 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 PCDHA1Q9Y5I3 950 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 SCN5AQ14524 2016 aa20.93■□□□□ 0.94
CHMP2A-208ENST00000601220 EPOPA6NHQ4 379 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 CYTH3O43739 400 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 POU3F3P20264 500 aaPredicted RBP20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 PSEN2P49810 448 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 SP2Q02086 613 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 TROAPQ12815 778 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 MYSM1Q5VVJ2 828 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 TRAF7Q6Q0C0 670 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 HERC6Q8IVU3 1022 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 SAMD3Q8N6K7 520 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 FTOQ9C0B1 505 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 THEGQ9P2T0 379 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 MRVI1Q9Y6F6 885 aa20.92■□□□□ 0.94
CHMP2A-208ENST00000601220 RBAK-RBAKDNI3L0D1 243 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 RFXAPO00287 272 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 BAIAP3O94812 1187 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 F2P00734 622 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 CXCL10P02778 98 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 SELPP16109 830 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 HOXA13P31271 388 aaPredicted RBP20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 HIC1Q14526 733 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 PGM5Q15124 567 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 TCTN1Q2MV58 587 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 TRIM71Q2Q1W2 868 aaKnown RBP20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 PIGSQ96S52 555 aa20.91■□□□□ 0.94
CHMP2A-208ENST00000601220 NBNO60934 754 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 MYCLP12524 364 aaPredicted RBP20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 TAP1Q03518 808 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 MFSD10Q14728 455 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 CELF3Q5SZQ8 465 aaKnown RBP20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 DHX37Q8IY37 1157 aaKnown RBP20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 CCDC155Q8N6L0 562 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 WNT8BQ93098 351 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 MTCH2Q9Y6C9 303 aa20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
CHMP2A-208ENST00000601220 IFIT3O14879 490 aaKnown RBP20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 PPFIA4O75335 1185 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 ZNF286BP0CG31 522 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 CKBP12277 381 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 MRPS5P82675 430 aaKnown RBP20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 ZNF200P98182 395 aaPredicted RBP20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 TRDNQ13061 729 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 KIAA0753Q2KHM9 967 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 HSDL1Q3SXM5 330 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 LRRC8DQ7L1W4 858 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 C7orf31Q8N865 590 aa20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 GPKOWQ92917 476 aaPredicted RBP eCLIP20.89■□□□□ 0.93
CHMP2A-208ENST00000601220 ALG1Q9BT22 464 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms