RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ZBBXA8MT70 800 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 IQCF3P0C7M6 154 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 CHMP4BP1P59074 171 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 PTGISQ16647 500 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 DGKDQ16760 1214 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 CHST3Q7LGC8 479 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 SESTD1Q86VW0 696 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 NCOA7Q8NI08 942 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 KAT2BQ92831 832 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 NOD1Q9Y239 953 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 PCDHA11Q9Y5I1 949 aa19.74■□□□□ 0.75
SCAF1-204ENST00000601038 UNC80Q8N2C7 3258 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 E7EWF7 191 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 SGSM2O43147 1006 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 ACTN1P12814 892 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 ATP2A2P16615 1042 aaKnown RBP19.73■□□□□ 0.75
SCAF1-204ENST00000601038 RABGGTBP53611 331 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 LAMC2Q13753 1193 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 SART3Q15020 963 aaKnown RBP19.73■□□□□ 0.75
SCAF1-204ENST00000601038 SLC35G1Q2M3R5 365 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 RALYLQ86SE5 291 aaKnown RBP19.73■□□□□ 0.75
SCAF1-204ENST00000601038 USP38Q8NB14 1042 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 PDCD2LQ9BRP1 358 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 MRVI1Q9Y6F6 885 aa19.73■□□□□ 0.75
SCAF1-204ENST00000601038 CUL9Q8IWT3 2517 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 TROAPQ12815 778 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 WTAPQ15007 396 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 KCNV1Q6PIU1 500 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 HOMER1Q86YM7 354 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 PPTC7Q8NI37 304 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 CTAGE1Q96RT6 745 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 PIGSQ96S52 555 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 SENP2Q9HC62 589 aa19.72■□□□□ 0.75
SCAF1-204ENST00000601038 SCN5AQ14524 2016 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 GBF1Q92538 1859 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 RGS20O76081 388 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 MYCLP12524 364 aaPredicted RBP19.71■□□□□ 0.75
SCAF1-204ENST00000601038 HOXA13P31271 388 aaPredicted RBP19.71■□□□□ 0.75
SCAF1-204ENST00000601038 ADGRE1Q14246 886 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 GDF6Q6KF10 455 aaPredicted RBP19.71■□□□□ 0.75
SCAF1-204ENST00000601038 VSIG10LQ86VR7 867 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 DHX37Q8IY37 1157 aaKnown RBP19.71■□□□□ 0.75
SCAF1-204ENST00000601038 CCDC155Q8N6L0 562 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 CAGE1Q8TC20 777 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 MAP4K1Q92918 833 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 KATNAL1Q9BW62 490 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 TAF6LQ9Y6J9 622 aa19.71■□□□□ 0.75
SCAF1-204ENST00000601038 BAZ2BQ9UIF8 2168 aaKnown RBP19.7■□□□□ 0.74
SCAF1-204ENST00000601038 PNMA6FA0A0J9YX94 578 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 GCOM1H8Y6P7 765 aaPredicted RBP19.7■□□□□ 0.74
SCAF1-204ENST00000601038 CYTH3O43739 400 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 POLR2MP0CAP2 368 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 MYOGP15173 224 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
SCAF1-204ENST00000601038 PGM5Q15124 567 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 PPP2R2DQ66LE6 453 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 CATIPQ7Z7H3 387 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 PHOSPHO2Q8TCD6 241 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 IGDCC4Q8TDY8 1250 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 AFAP1L1Q8TED9 768 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 FTOQ9C0B1 505 aaKnown RBP eCLIP19.7■□□□□ 0.74
SCAF1-204ENST00000601038 GTF2IRD1Q9UHL9 959 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 EYSQ5T1H1 3165 aa19.7■□□□□ 0.74
SCAF1-204ENST00000601038 TRIP12Q14669 1992 aaPredicted RBP19.7■□□□□ 0.74
SCAF1-204ENST00000601038 PPFIA4O75335 1185 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 TGFB3P10600 412 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 HOXD8P13378 290 aaPredicted RBP19.69■□□□□ 0.74
SCAF1-204ENST00000601038 PSEN2P49810 448 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 TMEM67Q5HYA8 995 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 CELF3Q5SZQ8 465 aaKnown RBP19.69■□□□□ 0.74
SCAF1-204ENST00000601038 MYSM1Q5VVJ2 828 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 C7orf31Q8N865 590 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 SYMPKQ92797 1274 aaKnown RBP19.69■□□□□ 0.74
SCAF1-204ENST00000601038 SLC9A7Q96T83 725 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 HDAC6Q9UBN7 1215 aa19.69■□□□□ 0.74
SCAF1-204ENST00000601038 HAS3O00219 553 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 PARNO95453 639 aaKnown RBP19.68■□□□□ 0.74
SCAF1-204ENST00000601038 F2P00734 622 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 IGFBP4P22692 258 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 CCND2P30279 289 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 ANTXR2P58335 489 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 RBL2Q08999 1139 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 MFSD10Q14728 455 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 KIAA0753Q2KHM9 967 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 FCHSD1Q86WN1 690 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 MB21D2Q8IYB1 491 aaPredicted RBP19.68■□□□□ 0.74
SCAF1-204ENST00000601038 IL31RAQ8NI17 732 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 PPM1EQ8WY54 764 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 ALG1Q9BT22 464 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 RBM8AQ9Y5S9 174 aaKnown RBP19.68■□□□□ 0.74
SCAF1-204ENST00000601038 MYH7BA7E2Y1 1941 aa19.68■□□□□ 0.74
SCAF1-204ENST00000601038 PRUNE2Q8WUY3 3088 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 BAIAP3O94812 1187 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 SELPP16109 830 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 DHX38Q92620 1227 aaKnown RBP19.67■□□□□ 0.74
SCAF1-204ENST00000601038 SPATA33Q96N06 139 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 MTA3Q9BTC8 594 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 TET1Q8NFU7 2136 aa19.67■□□□□ 0.74
SCAF1-204ENST00000601038 TANC1Q9C0D5 1861 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms