RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 VWCEQ96DN2 955 aa17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 LSG1Q9H089 658 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 GBF1Q92538 1859 aa17.44■□□□□ 0.38
SHKBP1-226ENST00000600791 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 RGS20O76081 388 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 FOSL2P15408 326 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 PTPN11Q06124 597 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 TRAF1Q13077 416 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 MAFAQ8NHW3 353 aaPredicted RBP17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 IL31RAQ8NI17 732 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 MTIF3Q9H2K0 278 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 ZNF576Q9H609 170 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 MRVI1Q9Y6F6 885 aa17.43■□□□□ 0.38
SHKBP1-226ENST00000600791 CHD7Q9P2D1 2997 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 PNMA6FA0A0J9YX94 578 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 DLL1O00548 723 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 MYCLP12524 364 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 PGM5Q15124 567 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 KAT2BQ92831 832 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 EMID1Q96A84 441 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 MYL10Q9BUA6 226 aa17.42■□□□□ 0.38
SHKBP1-226ENST00000600791 PITPNM1O00562 1244 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 PRC1O43663 620 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 DDAH1O94760 285 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 PFKMP08237 780 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 DGKDQ16760 1214 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 VSIG10LQ86VR7 867 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
SHKBP1-226ENST00000600791 SLC27A2O14975 620 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 MCM5P33992 734 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 RAB30Q15771 203 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 PTGISQ16647 500 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 SESTD1Q86VW0 696 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 FCHSD1Q86WN1 690 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 DHX37Q8IY37 1157 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 PPTC7Q8NI37 304 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 CTAGE1Q96RT6 745 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 MAP3K14Q99558 947 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 SPZ1Q9BXG8 430 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 NOD1Q9Y239 953 aa17.4■□□□□ 0.38
SHKBP1-226ENST00000600791 SH2B2O14492 632 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 F2P00734 622 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 ZNF286BP0CG31 522 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 CCND2P30279 289 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 LAMC2Q13753 1193 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 GDF6Q6KF10 455 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 ZFP91Q96JP5 570 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 FRMPD4Q14CM0 1322 aa17.39■□□□□ 0.37
SHKBP1-226ENST00000600791 MYO9BQ13459 2157 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 ZBBXA8MT70 800 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 SORBS3O60504 671 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 IQCF3P0C7M6 154 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 HOXD8P13378 290 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 UBA1P22314 1058 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 KIF5BP33176 963 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 RFC2P35250 354 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 BFSP2Q13515 415 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 NECTIN1Q15223 517 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 MYSM1Q5VVJ2 828 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 NFXL1Q6ZNB6 911 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 CENPQQ7L2Z9 268 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 RETREG2Q8NC44 543 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 TMEM87BQ96K49 555 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 YBX2Q9Y2T7 364 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 TET1Q8NFU7 2136 aa17.38■□□□□ 0.37
SHKBP1-226ENST00000600791 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
SHKBP1-226ENST00000600791 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
SHKBP1-226ENST00000600791 GGPS1O95749 300 aa17.37■□□□□ 0.37
SHKBP1-226ENST00000600791 RXRAP19793 462 aa17.37■□□□□ 0.37
SHKBP1-226ENST00000600791 PSEN2P49810 448 aa17.37■□□□□ 0.37
SHKBP1-226ENST00000600791 SP2Q02086 613 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms