RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 NSRP1Q9H0G5 558 aaKnown RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 PHAXQ9H814 394 aaKnown RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SUCLA2Q9P2R7 463 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 LRCH1Q9Y2L9 728 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 DEPDC5O75140 1603 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SAMD9LQ8IVG5 1584 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 HSD17B3P37058 310 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 MAP7Q14244 749 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 HLTFQ14527 1009 aaKnown RBP eCLIP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 LRRC34Q8IZ02 419 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 STAG2Q8N3U4 1231 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF317Q96PQ6 595 aaPredicted RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 DDX23Q9BUQ8 820 aaKnown RBP10.78□□□□□ -0.68
NFKB1-212ENST00000600343 ITGB1BP2Q9UKP3 347 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 SYCP2Q9BX26 1530 aa10.78□□□□□ -0.68
NFKB1-212ENST00000600343 MAGEA13PA6NCF6 341 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 MMEP08473 750 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 TPBGLP0DKB5 382 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 SULT2A1Q06520 285 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 IMMTQ16891 758 aaKnown RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 THOC7Q6I9Y2 204 aaKnown RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 NFRKBQ6P4R8 1299 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 ZNF589Q86UQ0 364 aaPredicted RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 RBBP8NLQ8NC74 664 aaPredicted RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 HAUS1Q96CS2 278 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 PUS3Q9BZE2 481 aaKnown RBP10.77□□□□□ -0.68
NFKB1-212ENST00000600343 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 HYOU1Q9Y4L1 999 aa10.77□□□□□ -0.68
NFKB1-212ENST00000600343 A0A0J9YVX5 310 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 TACC1O75410 805 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 CHGBP05060 677 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 ITGA2BP08514 1039 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 ETS2P15036 469 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 FBLN1P23142 703 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 DHX9Q08211 1270 aaKnown RBP10.77□□□□□ -0.69
NFKB1-212ENST00000600343 CARMIL2Q6F5E8 1435 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 ASAP3Q8TDY4 903 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 CASKIN2Q8WXE0 1202 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 IQCDQ96DY2 449 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 MIS12Q9H081 205 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 SENP3Q9H4L4 574 aaPredicted RBP10.77□□□□□ -0.69
NFKB1-212ENST00000600343 INIPQ9NRY2 104 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 TRIM33Q9UPN9 1127 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 DUSP10Q9Y6W6 482 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 DCDC2CA8MYV0 355 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 EIF3FO00303 357 aaPredicted RBP10.77□□□□□ -0.69
NFKB1-212ENST00000600343 NVLO15381 856 aaKnown RBP10.77□□□□□ -0.69
NFKB1-212ENST00000600343 SKIP12755 728 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 USH1GQ495M9 461 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 PALB2Q86YC2 1186 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 MAP7D3Q8IWC1 876 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 TRIML1Q8N9V2 468 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 NUDCD1Q96RS6 583 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 EFR3BQ9Y2G0 817 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 CD2APQ9Y5K6 639 aa10.77□□□□□ -0.69
NFKB1-212ENST00000600343 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 H0Y3Z8 333 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 PPP6R2O75170 966 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ASLP04424 464 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CYLC1P35663 651 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 BNIP1Q12981 228 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 DUS1LQ6P1R4 473 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ZC3H18Q86VM9 953 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CENPTQ96BT3 561 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 HAPLN3Q96S86 360 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SIKE1Q9BRV8 207 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 VPS16Q9H269 839 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 TUBA8Q9NY65 449 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CROTQ9UKG9 612 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ATP9AO75110 1047 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 PEX11AO75192 247 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SHBGP04278 402 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 TRIM21P19474 475 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 VARSP26640 1264 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CD97P48960 835 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 GSTM4Q03013 218 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 PLS1Q14651 629 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 GRAMD4Q6IC98 578 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 MIGA2Q7L4E1 593 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 PTF1AQ7RTS3 328 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SCUBE1Q8IWY4 988 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 PIGOQ8TEQ8 1089 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CATSPER2Q96P56 530 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 POLR3CQ9BUI4 534 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 USP44Q9H0E7 712 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 TSKSQ9UJT2 592 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 LUC7L2Q9Y383 392 aaKnown RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ZNF711Q9Y462 761 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms