RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SOX10P56693 466 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 NLRP5P59047 1200 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 IRX5P78411 483 aaPredicted RBP15.75■□□□□ 0.11
VRK3-219ENST00000600137 PCNX4Q63HM2 1172 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 IQSEC1Q6DN90 963 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 UBE2Q1Q7Z7E8 422 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 CCDC148Q8NFR7 591 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 FAM184BQ9ULE4 1060 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
VRK3-219ENST00000600137 MKI67P46013 3256 aaKnown RBP15.75■□□□□ 0.11
VRK3-219ENST00000600137 B4DLN1 442 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 ADAMTS4O75173 837 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 MYCLP12524 364 aaPredicted RBP15.74■□□□□ 0.11
VRK3-219ENST00000600137 NKX3-2P78367 333 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 SEMA3FQ13275 785 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 GJC2Q5T442 439 aaPredicted RBP15.74■□□□□ 0.11
VRK3-219ENST00000600137 BLIDQ8IZY5 108 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 REXO1Q8N1G1 1221 aaKnown RBP15.74■□□□□ 0.11
VRK3-219ENST00000600137 OXER1Q8TDS5 423 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 WASF1Q92558 559 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 TNFRSF25Q93038 417 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 INPP4AQ96PE3 977 aaPredicted RBP15.74■□□□□ 0.11
VRK3-219ENST00000600137 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
VRK3-219ENST00000600137 SPDYE3A6NKU9 549 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 MSCO60682 206 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 DUSP11O75319 330 aaKnown RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 CYP3A4P08684 503 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 ITGB5P18084 799 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 CCND2P30279 289 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 SREBF1P36956 1147 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 SP2Q02086 613 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 TNFAIP2Q03169 654 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 EARS2Q5JPH6 523 aaKnown RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 KRT40Q6A162 431 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 CCSAPQ6IQ19 270 aaPredicted RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 GALNT17Q6IS24 598 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 XRRA1Q6P2D8 792 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 KLHDC9Q8NEP7 349 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 WDR11Q9BZH6 1224 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 BCAS3Q9H6U6 928 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 RTEL1Q9NZ71 1219 aa15.73■□□□□ 0.11
VRK3-219ENST00000600137 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
VRK3-219ENST00000600137 ICAM3P32942 547 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 GJA9P57773 515 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 SEPT14Q6ZU15 432 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 SCFD2Q8WU76 684 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 COPS5Q92905 334 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 MPHOSPH6Q99547 160 aaKnown RBP15.72■□□□□ 0.11
VRK3-219ENST00000600137 DNAH12Q6ZR08 3092 aa15.72■□□□□ 0.11
VRK3-219ENST00000600137 MYADML2A6NDP7 307 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 SPATA31C2B4DYI2 1134 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 K7ELQ4 463 aaPredicted RBP15.71■□□□□ 0.11
VRK3-219ENST00000600137 STAM2O75886 525 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 PGK1P00558 417 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 TFRCP02786 760 aaKnown RBP15.71■□□□□ 0.11
VRK3-219ENST00000600137 MMP1P03956 469 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 RARBP10826 455 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 CAPN2P17655 700 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 RGS19P49795 217 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 ARHGAP4P98171 946 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 LRRC41Q15345 812 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 LY6KQ17RY6 165 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 MCTP2Q6DN12 878 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 Q9Y3F1 56 aa15.71■□□□□ 0.11
VRK3-219ENST00000600137 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 IGLV3-22A0A075B6J6 115 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 BTBD18B2RXH4 712 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 MEIS1O00470 390 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
VRK3-219ENST00000600137 GJB2P29033 226 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 CIITAP33076 1130 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 FOSBP53539 338 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 NR5A1Q13285 461 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 XPNPEP3Q9NQH7 507 aa15.7■□□□□ 0.1
VRK3-219ENST00000600137 FAM205CA6NFA0 338 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 FAM86B1E9PN63 330 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 DYNC1LI2O43237 492 aaPredicted RBP15.69■□□□□ 0.1
VRK3-219ENST00000600137 ATP9AO75110 1047 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 FAM86B2P0C5J1 330 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 ARP10275 920 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 TGFB3P10600 412 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 COL6A1P12109 1028 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 XBP1P17861 261 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 CST5P28325 142 aaPredicted RBP15.69■□□□□ 0.1
VRK3-219ENST00000600137 GUCY1B3Q02153 619 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 ARHGAP1Q07960 439 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 TTLL4Q14679 1199 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 ANKLE1Q8NAG6 615 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 TBCKQ8TEA7 893 aa15.69■□□□□ 0.1
VRK3-219ENST00000600137 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms