RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 ARNTL2Q8WYA1 636 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 KAT2BQ92831 832 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
SMG9-210ENST00000600097 OSBPL3Q9H4L5 887 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 DIAPH3Q9NSV4 1193 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 COL20A1Q9P218 1284 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 COG5Q9UP83 839 aa20.06■□□□□ 0.8
SMG9-210ENST00000600097 HIP1O00291 1037 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 TLL1O43897 1013 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 EIF3JO75822 258 aaKnown RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 PARP1P09874 1014 aaKnown RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 TFF2Q03403 129 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 CWC27Q6UX04 472 aaKnown RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 LRRC8DQ7L1W4 858 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 C7orf31Q8N865 590 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 ENAHQ8N8S7 591 aaPredicted RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 EMID1Q96A84 441 aaPredicted RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 KATNAL1Q9BW62 490 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 RWDD1Q9H446 243 aaPredicted RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 GTF2IRD1Q9UHL9 959 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 DDX41Q9UJV9 622 aaKnown RBP20.05■□□□□ 0.8
SMG9-210ENST00000600097 TRANK1O15050 2925 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 TANC1Q9C0D5 1861 aa20.05■□□□□ 0.8
SMG9-210ENST00000600097 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
SMG9-210ENST00000600097 EPOPA6NHQ4 379 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 B4E1Z4 1266 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
SMG9-210ENST00000600097 LAMC2Q13753 1193 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 IMMTQ16891 758 aaKnown RBP20.04■□□□□ 0.8
SMG9-210ENST00000600097 DSCC1Q9BVC3 393 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 KRT23Q9C075 422 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 JMJD4Q9H9V9 463 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 ZSWIM5Q9P217 1185 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 CTNNA3Q9UI47 895 aa20.04■□□□□ 0.8
SMG9-210ENST00000600097 NR3C2P08235 984 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 EIF2AK2P19525 551 aaKnown RBP20.03■□□□□ 0.8
SMG9-210ENST00000600097 CNKSR3Q6P9H4 555 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 CHD1LQ86WJ1 897 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 PPTC7Q8NI37 304 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 DHX38Q92620 1227 aaKnown RBP20.03■□□□□ 0.8
SMG9-210ENST00000600097 UBAC1Q9BSL1 405 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 ZBED2Q9BTP6 218 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 AMNQ9BXJ7 453 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 CNNM2Q9H8M5 875 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 VAT1LQ9HCJ6 419 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 PXMP2Q9NR77 195 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
SMG9-210ENST00000600097 MRVI1Q9Y6F6 885 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 BDP1A6H8Y1 2624 aa20.03■□□□□ 0.8
SMG9-210ENST00000600097 ABHD14A-ACY1A0A1B0GW23 586 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 EFCAB14O75071 495 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 ARHGEF15O94989 841 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 CFBP00751 764 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 CXCL10P02778 98 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 CKBP12277 381 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 PSEN2P49810 448 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 KCNQ1P51787 676 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 GPNMBQ14956 572 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 HDAC6Q9UBN7 1215 aa20.02■□□□□ 0.8
SMG9-210ENST00000600097 F2P00734 622 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 HSD17B4P51659 736 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 GHRHRQ02643 423 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 PTK7Q13308 1070 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 GRB10Q13322 594 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 KCNV1Q6PIU1 500 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 DHX37Q8IY37 1157 aaKnown RBP20.01■□□□□ 0.79
SMG9-210ENST00000600097 SAMD3Q8N6K7 520 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 TET1Q8NFU7 2136 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 HLA-CQ95604 372 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 NECAB3Q96P71 396 aaPredicted RBP20.01■□□□□ 0.79
SMG9-210ENST00000600097 C1QTNF1Q9BXJ1 281 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 LMCD1Q9NZU5 365 aa20.01■□□□□ 0.79
SMG9-210ENST00000600097 HAS3O00219 553 aa20■□□□□ 0.79
SMG9-210ENST00000600097 NBNO60934 754 aa20■□□□□ 0.79
SMG9-210ENST00000600097 PPFIA4O75335 1185 aa20■□□□□ 0.79
SMG9-210ENST00000600097 NUCB1Q02818 461 aa20■□□□□ 0.79
SMG9-210ENST00000600097 MFSD10Q14728 455 aa20■□□□□ 0.79
SMG9-210ENST00000600097 KIAA0753Q2KHM9 967 aa20■□□□□ 0.79
SMG9-210ENST00000600097 IFIT1BQ5T764 474 aaKnown RBP20■□□□□ 0.79
SMG9-210ENST00000600097 KRT40Q6A162 431 aa20■□□□□ 0.79
SMG9-210ENST00000600097 ALG1Q9BT22 464 aa20■□□□□ 0.79
SMG9-210ENST00000600097 REV3LO60673 3130 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 GJB5O95377 273 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 HOXD8P13378 290 aaPredicted RBP19.99■□□□□ 0.79
SMG9-210ENST00000600097 TRAF1Q13077 416 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 IKBKEQ14164 716 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 RAD9AQ99638 391 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 PDCD2LQ9BRP1 358 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 LAMA4Q16363 1823 aa19.99■□□□□ 0.79
SMG9-210ENST00000600097 TRIP12Q14669 1992 aaPredicted RBP19.98■□□□□ 0.79
SMG9-210ENST00000600097 LCHNA4D1U4 455 aa19.98■□□□□ 0.79
SMG9-210ENST00000600097 OPLAHO14841 1288 aa19.98■□□□□ 0.79
SMG9-210ENST00000600097 ZBTB5O15062 677 aa19.98■□□□□ 0.79
SMG9-210ENST00000600097 LPXNO60711 386 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms