RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
SHKBP1-219ENST00000599575 DUSP11O75319 330 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 RARBP10826 455 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 GJB2P29033 226 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 CNGA1P29973 690 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 TTLL4Q14679 1199 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 MTFR1Q15390 333 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 CCDC144BQ3MJ40 725 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 NIPA1Q7RTP0 329 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 NLRX1Q86UT6 975 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 CRYGNQ8WXF5 182 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 NAP1L4Q99733 375 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 KCNJ14Q9UNX9 436 aa18.9■□□□□ 0.62
SHKBP1-219ENST00000599575 CENPFP49454 3210 aa18.89■□□□□ 0.62
SHKBP1-219ENST00000599575 CCDC194A0A1B0GVG4 234 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 SGPL1O95470 568 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 CCND3P30281 292 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 ICAM3P32942 547 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 GJA8P48165 433 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 MRPS9P82933 396 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 ARHGAP4P98171 946 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 TNFAIP2Q03169 654 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 NONOQ15233 471 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 DUSP28Q4G0W2 176 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 PRAMEF19Q5SWL8 479 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 GPRASP2Q96D09 838 aa18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-219ENST00000599575 FIBPO43427 364 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 CIITAP33076 1130 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 NKX3-2P78367 333 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 CEP55Q53EZ4 464 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 LHX8Q68G74 356 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 DIS3L2Q8IYB7 885 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 ANKLE1Q8NAG6 615 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 GIMAP8Q8ND71 665 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 IL31RAQ8NI17 732 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 CRISPLD2Q9H0B8 497 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 SPC25Q9HBM1 224 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 TMEM260Q9NX78 707 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 UBIAD1Q9Y5Z9 338 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 LCTP09848 1927 aa18.88■□□□□ 0.61
SHKBP1-219ENST00000599575 CCDC62Q6P9F0 684 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 EEPD1Q7L9B9 569 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 ARRDC4Q8NCT1 418 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 SENP7Q9BQF6 1050 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 OGDHLQ9ULD0 1010 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
SHKBP1-219ENST00000599575 SPATA31C2B4DYI2 1134 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 H3BQV1 296 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 RGS20O76081 388 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 GCFC2P16383 781 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 ZNF76P36508 570 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 SETQ01105 290 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 IFFO2Q5TF58 517 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 TNFRSF25Q93038 417 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 EMID1Q96A84 441 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 MXRA8Q9BRK3 442 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 JADE2Q9NQC1 790 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 GJB4Q9NTQ9 266 aa18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 GNEQ9Y223 722 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-219ENST00000599575 CYP3A7-CYP3A51PA0A087WV96 503 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 BTBD18B2RXH4 712 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 MEIS1O00470 390 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 CYP3A7P24462 503 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 U2AF2P26368 475 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 GJA9P57773 515 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 MTMR1Q13613 665 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 NEDD9Q14511 834 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 SEPT14Q6ZU15 432 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 RNF180Q86T96 592 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 RASGRP4Q8TDF6 673 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 AP5M1Q9H0R1 490 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 UPF3AQ9H1J1 476 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 XPNPEP3Q9NQH7 507 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 PDGFCQ9NRA1 345 aa18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 DDX41Q9UJV9 622 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-219ENST00000599575 SMPD1P17405 629 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 ITGB5P18084 799 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 CST5P28325 142 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 LAMC2Q13753 1193 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 GNL2Q13823 731 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 PGBD1Q96JS3 809 aa18.84■□□□□ 0.61
SHKBP1-219ENST00000599575 ADAMTS3O15072 1205 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 DTNBO60941 627 aa18.83■□□□□ 0.6
SHKBP1-219ENST00000599575 MYCP01106 439 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms