RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 SORBS3O60504 671 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 CA3P07451 260 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 RFC2P35250 354 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 HSD17B4P51659 736 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
LSM4-205ENST00000597776 BFSP2Q13515 415 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 SLC35G1Q2M3R5 365 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 TTC22Q5TAA0 569 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 SYMPKQ92797 1274 aaKnown RBP12.26□□□□□ -0.45
LSM4-205ENST00000597776 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 MAF1Q9H063 256 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
LSM4-205ENST00000597776 MRVI1Q9Y6F6 885 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 TAF6LQ9Y6J9 622 aa12.26□□□□□ -0.45
LSM4-205ENST00000597776 MYH6P13533 1939 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 KIAA1217Q5T5P2 1943 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 TRANK1O15050 2925 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 RFXAPO00287 272 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
LSM4-205ENST00000597776 ARHGEF15O94989 841 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 NR3C2P08235 984 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 ZNF286BP0CG31 522 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
LSM4-205ENST00000597776 ACTN1P12814 892 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
LSM4-205ENST00000597776 PTH1RQ03431 593 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 HOMER1Q86YM7 354 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 IL31RAQ8NI17 732 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 DHX38Q92620 1227 aaKnown RBP12.25□□□□□ -0.45
LSM4-205ENST00000597776 MTMR8Q96EF0 704 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 CERS4Q9HA82 394 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 MYO9BQ13459 2157 aa12.25□□□□□ -0.45
LSM4-205ENST00000597776 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
LSM4-205ENST00000597776 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 ZBTB5O15062 677 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 RGS20O76081 388 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 CYP21A2P08686 494 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 CASTP20810 708 aaKnown RBP12.24□□□□□ -0.45
LSM4-205ENST00000597776 PSEN2P49810 448 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 GPNMBQ14956 572 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 DGKDQ16760 1214 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 HERC6Q8IVU3 1022 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 EMID1Q96A84 441 aaPredicted RBP12.24□□□□□ -0.45
LSM4-205ENST00000597776 ZFP91Q96JP5 570 aaPredicted RBP12.24□□□□□ -0.45
LSM4-205ENST00000597776 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 ALG1Q9BT22 464 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 GTF2IRD1Q9UHL9 959 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 SUPT16HQ9Y5B9 1047 aaKnown RBP12.24□□□□□ -0.45
LSM4-205ENST00000597776 PCDHA1Q9Y5I3 950 aa12.24□□□□□ -0.45
LSM4-205ENST00000597776 IFIT3O14879 490 aaKnown RBP12.23□□□□□ -0.45
LSM4-205ENST00000597776 CYTH3O43739 400 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 F2P00734 622 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 CHMLP26374 656 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
LSM4-205ENST00000597776 GHRHRQ02643 423 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 TRDNQ13061 729 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 MFSD10Q14728 455 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 GRM4Q14833 912 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 STOX1Q6ZVD7 989 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 LRRC8DQ7L1W4 858 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 SPRED2Q7Z698 418 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 TMCO2Q7Z6W1 182 aaPredicted RBP12.23□□□□□ -0.45
LSM4-205ENST00000597776 DHX37Q8IY37 1157 aaKnown RBP12.23□□□□□ -0.45
LSM4-205ENST00000597776 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 C7orf31Q8N865 590 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 CAGE1Q8TC20 777 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 ATXN2LQ8WWM7 1075 aaKnown RBP12.23□□□□□ -0.45
LSM4-205ENST00000597776 ASB2Q96Q27 587 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 PIGSQ96S52 555 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
LSM4-205ENST00000597776 HAS3O00219 553 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 GGPS1O95749 300 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 CKBP12277 381 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 SELPP16109 830 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
LSM4-205ENST00000597776 SP2Q02086 613 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 TAP1Q03518 808 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 PGM5Q15124 567 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 TCTN1Q2MV58 587 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 HSDL1Q3SXM5 330 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 KRT40Q6A162 431 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
LSM4-205ENST00000597776 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 FCHSD1Q86WN1 690 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 PHOSPHO2Q8TCD6 241 aa12.22□□□□□ -0.45
LSM4-205ENST00000597776 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms