RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 OLFML2BQ68BL8 750 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 HEATR3Q7Z4Q2 680 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 PRPF38AQ8NAV1 312 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 C8orf76Q96K31 380 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 RABGAP1Q9Y3P9 1069 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 MTCH2Q9Y6C9 303 aa13.86□□□□□ -0.19
SHKBP1-213ENST00000597325 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 SMCHD1A6NHR9 2005 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 VPS13AQ96RL7 3174 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 H3BQV1 296 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 ZBTB5O15062 677 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 CYTH3O43739 400 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PDIA4P13667 645 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 FDPSP14324 419 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 TRAF1Q13077 416 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 SKIV2LQ15477 1246 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PIGSQ96S52 555 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 JMJD4Q9H9V9 463 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 FBXO28Q9NVF7 368 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
SHKBP1-213ENST00000597325 PNMA6FA0A0J9YX94 578 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 A0A1W2PQ45 241 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 A0A1W2PQY0 241 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 VPS37CA5D8V6 355 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 FDX1P10109 184 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 CCNA1P78396 465 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 COG2Q14746 738 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 SLC35G1Q2M3R5 365 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 PHOX2BQ99453 314 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 BRWD1Q9NSI6 2320 aa13.84□□□□□ -0.19
SHKBP1-213ENST00000597325 PARP14Q460N5 1801 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 ZBED4O75132 1171 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 CSF2RAP15509 400 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 PKN1Q16512 942 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 FBXO11Q86XK2 927 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 MTMR8Q96EF0 704 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 SH3GLB2Q9NR46 395 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 PNMA2Q9UL42 364 aa13.83□□□□□ -0.2
SHKBP1-213ENST00000597325 DCDC2CA8MYV0 355 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 STX6O43752 255 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 ACRP10323 421 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 SYT1P21579 422 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 NAPAP54920 295 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 SNAP25P60880 206 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 NUCB2P80303 420 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 SAFBQ15424 915 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 PRAMEF19Q5SWL8 479 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 WDR78Q5VTH9 848 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 PPP1R18Q6NYC8 613 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 GPKOWQ92917 476 aaPredicted RBP eCLIP13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 HLA-CQ95604 372 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 ATG4CQ96DT6 458 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 AMNQ9BXJ7 453 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 BRMS1Q9HCU9 246 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 IVNS1ABPQ9Y6Y0 642 aa13.82□□□□□ -0.2
SHKBP1-213ENST00000597325 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 STXBP3O00186 592 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 VWA5AO00534 786 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 DSG3P32926 999 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 DDIT3P35638 169 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 USH1GQ495M9 461 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 PPP2R2DQ66LE6 453 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 KRT40Q6A162 431 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 LBX2Q6XYB7 198 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 MB21D1Q8N884 522 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 RGS22Q8NE09 1264 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 UIMC1Q96RL1 719 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 SLC38A10Q9HBR0 1119 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 BARHL2Q9NY43 387 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 BTBD7Q9P203 1132 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
SHKBP1-213ENST00000597325 RFXAPO00287 272 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 ICAM1P05362 532 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 CALML3P27482 149 aa13.8□□□□□ -0.2
SHKBP1-213ENST00000597325 ADORA2AP29274 412 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms