RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 ARHGAP4P98171 946 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 MTFR1Q15390 333 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 EARS2Q5JPH6 523 aaKnown RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 OLFML2BQ68BL8 750 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 MCTP2Q6DN12 878 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 IWS1Q96ST2 819 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
ZNF548-206ENST00000597047 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
ZNF548-206ENST00000597047 ZNF236Q9UL36 1845 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 EIF3JO75822 258 aaKnown RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 TXNP10599 105 aaKnown RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 CCL5P13501 91 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 PTGS1P23219 599 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 SP4Q02446 784 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 NPY5RQ15761 445 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 GJC2Q5T442 439 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 DAGLBQ8NCG7 672 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 TRPV1Q8NER1 839 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 CYP2W1Q8TAV3 490 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 WDR11Q9BZH6 1224 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 ABHD16BQ9H3Z7 469 aa10.59□□□□□ -0.71
ZNF548-206ENST00000597047 NOL7Q9UMY1 257 aaKnown RBP10.59□□□□□ -0.71
ZNF548-206ENST00000597047 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.71
ZNF548-206ENST00000597047 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.58□□□□□ -0.72
ZNF548-206ENST00000597047 DDX39AO00148 427 aaKnown RBP10.58□□□□□ -0.72
ZNF548-206ENST00000597047 TDP2O95551 362 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 CHMP4BP1P59074 171 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
ZNF548-206ENST00000597047 GHRHRQ02643 423 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 TNFAIP2Q03169 654 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 CEBPZQ03701 1054 aaKnown RBP10.58□□□□□ -0.72
ZNF548-206ENST00000597047 ZNF174Q15697 407 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 LY6KQ17RY6 165 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 PRR16Q569H4 304 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 NEK8Q86SG6 692 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 PLA2G4DQ86XP0 818 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 NOSTRINQ8IVI9 506 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 COPS5Q92905 334 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 MAF1Q9H063 256 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 FOXP1Q9H334 677 aaPredicted RBP10.58□□□□□ -0.72
ZNF548-206ENST00000597047 VTA1Q9NP79 307 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 FAM184BQ9ULE4 1060 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 RPTORQ8N122 1335 aa10.58□□□□□ -0.72
ZNF548-206ENST00000597047 CCDC85CA6NKD9 419 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 M0R2N6 131 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 DYNC1LI2O43237 492 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 ZNF865P0CJ78 1059 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 ARP10275 920 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 MCM7P33993 719 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 SREBF1P36956 1147 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 MTMR1Q13613 665 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 PKP1Q13835 747 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 NBR1Q14596 966 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 TTLL4Q14679 1199 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 TAPT1Q6NXT6 567 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 FAM177A1Q8N128 213 aaPredicted RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 MSL3Q8N5Y2 521 aaKnown RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 GJA10Q969M2 543 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 DEFB118Q96PH6 123 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 MXRA8Q9BRK3 442 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
ZNF548-206ENST00000597047 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
ZNF548-206ENST00000597047 KIAA1217Q5T5P2 1943 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 FAM86B1E9PN63 330 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 ARIH2O95376 493 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 FAM86B2P0C5J1 330 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 RARBP10826 455 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 CYBAP13498 195 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 AKR1A1P14550 325 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 SMPD1P17405 629 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 ITGB5P18084 799 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 EDNRBP24530 442 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 USP11P51784 963 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 TTC38Q5R3I4 469 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 XRRA1Q6P2D8 792 aa10.56□□□□□ -0.72
ZNF548-206ENST00000597047 DHX37Q8IY37 1157 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms