RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 RXRAP19793 462 aa24.92■■□□□ 1.58
C19orf54-205ENST00000596809 SRBD1Q8N5C6 995 aaKnown RBP24.92■■□□□ 1.58
C19orf54-205ENST00000596809 NEK1Q96PY6 1258 aa24.92■■□□□ 1.58
C19orf54-205ENST00000596809 NOC4LQ9BVI4 516 aaKnown RBP24.92■■□□□ 1.58
C19orf54-205ENST00000596809 TRMT13Q9NUP7 481 aaKnown RBP24.92■■□□□ 1.58
C19orf54-205ENST00000596809 UMODL1Q5DID0 1318 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 RGS20O76081 388 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 PLEKHA8P1O95397 391 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 MMP3P08254 477 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 TSGA10IPQ3SY00 556 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 TMEM240Q5SV17 173 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 CMTR1Q8N1G2 835 aaKnown RBP24.91■■□□□ 1.58
C19orf54-205ENST00000596809 IL31RAQ8NI17 732 aa24.91■■□□□ 1.58
C19orf54-205ENST00000596809 MYH6P13533 1939 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 ACRP10323 421 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 CCL23P55773 120 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 FAM47CQ5HY64 1035 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 NFRKBQ6P4R8 1299 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 SGMS1Q86VZ5 419 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 RAB11FIP4Q86YS3 637 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 FANCBQ8NB91 859 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 PPP1R13LQ8WUF5 828 aa24.9■■□□□ 1.58
C19orf54-205ENST00000596809 SEC63Q9UGP8 760 aaKnown RBP24.9■■□□□ 1.58
C19orf54-205ENST00000596809 CASTP20810 708 aaKnown RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 CCND2P30279 289 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 EXOSC10Q01780 885 aaKnown RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 PTPN11Q06124 597 aaPredicted RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 LAMC2Q13753 1193 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 ZNF697Q5TEC3 545 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 KCNV1Q6PIU1 500 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 ZNF365Q70YC5 407 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 DHX37Q8IY37 1157 aaKnown RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 RASEFQ8IZ41 740 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 EMID1Q96A84 441 aaPredicted RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 ZFP91Q96JP5 570 aaPredicted RBP24.89■■□□□ 1.58
C19orf54-205ENST00000596809 IL23AQ9NPF7 189 aa24.89■■□□□ 1.58
C19orf54-205ENST00000596809 CYP2C9P11712 490 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 CHMP4BP1P59074 171 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 DGKDQ16760 1214 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 ADCK5Q3MIX3 580 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 PSRC1Q6PGN9 363 aaPredicted RBP24.88■■□□□ 1.57
C19orf54-205ENST00000596809 SYNE3Q6ZMZ3 975 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 DHX32Q7L7V1 743 aaKnown RBP24.88■■□□□ 1.57
C19orf54-205ENST00000596809 FAM161BQ96MY7 647 aa24.88■■□□□ 1.57
C19orf54-205ENST00000596809 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.87■■□□□ 1.57
C19orf54-205ENST00000596809 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.87■■□□□ 1.57
C19orf54-205ENST00000596809 WNT8AQ9H1J5 351 aa24.87■■□□□ 1.57
C19orf54-205ENST00000596809 STXBP5LQ9Y2K9 1186 aa24.87■■□□□ 1.57
C19orf54-205ENST00000596809 BAZ2BQ9UIF8 2168 aaKnown RBP24.87■■□□□ 1.57
C19orf54-205ENST00000596809 TGFB3P10600 412 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 KRT32Q14532 448 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 RASIP1Q5U651 963 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 USP17L6PQ6QN14 398 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 TMTC3Q6ZXV5 915 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 MICU3Q86XE3 530 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 CCDC82Q8N4S0 544 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 PPTC7Q8NI37 304 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 SMARCC2Q8TAQ2 1214 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 KAT2BQ92831 832 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 CUL5Q93034 780 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 TCEANC2Q96MN5 208 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 SEMA6BQ9H3T3 888 aa24.86■■□□□ 1.57
C19orf54-205ENST00000596809 PIK3CDO00329 1044 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 MEIS2O14770 477 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 FGBP02675 491 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 SP2Q02086 613 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 CELF3Q5SZQ8 465 aaKnown RBP24.85■■□□□ 1.57
C19orf54-205ENST00000596809 MYSM1Q5VVJ2 828 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 APOA5Q6Q788 366 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 SCLYQ96I15 445 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 GUCD1Q96NT3 240 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 FRMPD4Q14CM0 1322 aa24.85■■□□□ 1.57
C19orf54-205ENST00000596809 hCG_1642624A0A1W2PR95 340 aa24.84■■□□□ 1.57
C19orf54-205ENST00000596809 GGPS1O95749 300 aa24.84■■□□□ 1.57
C19orf54-205ENST00000596809 MRPS9P82933 396 aaKnown RBP24.84■■□□□ 1.57
C19orf54-205ENST00000596809 RPUSD2Q8IZ73 545 aaKnown RBP24.84■■□□□ 1.57
C19orf54-205ENST00000596809 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
C19orf54-205ENST00000596809 BRPF3Q9ULD4 1205 aa24.84■■□□□ 1.57
C19orf54-205ENST00000596809 SORBS3O60504 671 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 PPFIA4O75335 1185 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 STAM2O75886 525 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 UBA1P22314 1058 aaKnown RBP24.83■■□□□ 1.57
C19orf54-205ENST00000596809 SESTD1Q86VW0 696 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 HERVK_113Q902F9 699 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 SPATA33Q96N06 139 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 PSTPIP2Q9H939 334 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 RTEL1Q9NZ71 1219 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 NOD1Q9Y239 953 aa24.83■■□□□ 1.57
C19orf54-205ENST00000596809 SCN10AQ9Y5Y9 1956 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 NEFLP07196 543 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 HMGB1P09429 215 aaKnown RBP24.82■■□□□ 1.56
C19orf54-205ENST00000596809 PTGISQ16647 500 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 HSDL1Q3SXM5 330 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 GNPTABQ3T906 1256 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 KCNB2Q92953 911 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 INPP4AQ96PE3 977 aaPredicted RBP24.82■■□□□ 1.56
C19orf54-205ENST00000596809 TTYH1Q9H313 450 aaPredicted RBP24.82■■□□□ 1.56
C19orf54-205ENST00000596809 MLXIPQ9HAP2 919 aa24.82■■□□□ 1.56
C19orf54-205ENST00000596809 RBM28Q9NW13 759 aaKnown RBP24.82■■□□□ 1.56
C19orf54-205ENST00000596809 KIAA1217Q5T5P2 1943 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms