RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 MICALL1Q8N3F8 863 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 STAG2Q8N3U4 1231 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 PHOSPHO2Q8TCD6 241 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 SLC9A7Q96T83 725 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 UBAC1Q9BSL1 405 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 CERS4Q9HA82 394 aa18.57■□□□□ 0.56
LINC02560-201ENST00000596379 DDX41Q9UJV9 622 aaKnown RBP18.57■□□□□ 0.56
LINC02560-201ENST00000596379 TANC1Q9C0D5 1861 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 RFXAPO00287 272 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 CFBP00751 764 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 SESTD1Q86VW0 696 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
LINC02560-201ENST00000596379 EIF3JO75822 258 aaKnown RBP18.55■□□□□ 0.56
LINC02560-201ENST00000596379 NR3C2P08235 984 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 DGKDQ16760 1214 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 IFIT1BQ5T764 474 aaKnown RBP18.55■□□□□ 0.56
LINC02560-201ENST00000596379 HERC6Q8IVU3 1022 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 CCDC155Q8N6L0 562 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 CAGE1Q8TC20 777 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
LINC02560-201ENST00000596379 AMNQ9BXJ7 453 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 IL25Q9H293 177 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 TSPYL2Q9H2G4 693 aaPredicted RBP18.55■□□□□ 0.56
LINC02560-201ENST00000596379 PXMP2Q9NR77 195 aa18.55■□□□□ 0.56
LINC02560-201ENST00000596379 PRRC2BQ5JSZ5 2229 aaKnown RBP18.55■□□□□ 0.56
LINC02560-201ENST00000596379 KIF28PB7ZC32 967 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 KLRF2D3W0D1 207 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 OPLAHO14841 1288 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 CYB5R4Q7L1T6 521 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 ADAMTS19Q8TE59 1207 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 AFAP1L1Q8TED9 768 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 ALG1Q9BT22 464 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 CHD7Q9P2D1 2997 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 HDAC6Q9UBN7 1215 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
LINC02560-201ENST00000596379 TCF20Q9UGU0 1960 aaKnown RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 EPOPA6NHQ4 379 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 PPP1R11O60927 126 aaPredicted RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 BAIAP3O94812 1187 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 ARHGEF15O94989 841 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 SELPP16109 830 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 PSEN2P49810 448 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 HSD17B4P51659 736 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 TAP1Q03518 808 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 GPNMBQ14956 572 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 SEC23AQ15436 765 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 DHX37Q8IY37 1157 aaKnown RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 DHX38Q92620 1227 aaKnown RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
LINC02560-201ENST00000596379 MTMR8Q96EF0 704 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 GTF2IRD1Q9UHL9 959 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 MTCH2Q9Y6C9 303 aa18.53■□□□□ 0.56
LINC02560-201ENST00000596379 ZBTB5O15062 677 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 GTPBP6O43824 516 aaPredicted RBP18.52■□□□□ 0.56
LINC02560-201ENST00000596379 POU3F3P20264 500 aaPredicted RBP18.52■□□□□ 0.56
LINC02560-201ENST00000596379 GHRHRQ02643 423 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 MFSD10Q14728 455 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 SKIV2LQ15477 1246 aaKnown RBP18.52■□□□□ 0.56
LINC02560-201ENST00000596379 LRRC8DQ7L1W4 858 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 IL27Q8NEV9 243 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 ARNTL2Q8WYA1 636 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 PDCD2LQ9BRP1 358 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 PCDHA1Q9Y5I3 950 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 PTPRSQ13332 1948 aa18.52■□□□□ 0.56
LINC02560-201ENST00000596379 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
LINC02560-201ENST00000596379 NCOR1O75376 2440 aa18.52■□□□□ 0.55
LINC02560-201ENST00000596379 PALM3A6NDB9 673 aaPredicted RBP18.51■□□□□ 0.55
LINC02560-201ENST00000596379 RGS20O76081 388 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 ZNF286BP0CG31 522 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 CKBP12277 381 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 HOXA13P31271 388 aaPredicted RBP18.51■□□□□ 0.55
LINC02560-201ENST00000596379 KCNJ6P48051 423 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 KIAA0753Q2KHM9 967 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 STOX1Q6ZVD7 989 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 PPTC7Q8NI37 304 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 UHRF1Q96T88 793 aaPredicted RBP18.51■□□□□ 0.55
LINC02560-201ENST00000596379 KATNAL1Q9BW62 490 aa18.51■□□□□ 0.55
LINC02560-201ENST00000596379 MAP3K20Q9NYL2 800 aaKnown RBP18.51■□□□□ 0.55
LINC02560-201ENST00000596379 HAS3O00219 553 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 TLL1O43897 1013 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 SORBS3O60504 671 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 NBNO60934 754 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
LINC02560-201ENST00000596379 TFF2Q03403 129 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 RBL2Q08999 1139 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 KRT40Q6A162 431 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 TMCO2Q7Z6W1 182 aaPredicted RBP18.5■□□□□ 0.55
LINC02560-201ENST00000596379 VSIG10LQ86VR7 867 aa18.5■□□□□ 0.55
LINC02560-201ENST00000596379 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 PPFIA4O75335 1185 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 PARNO95453 639 aaKnown RBP18.49■□□□□ 0.55
LINC02560-201ENST00000596379 F2P00734 622 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 CXCL10P02778 98 aa18.49■□□□□ 0.55
LINC02560-201ENST00000596379 BMP1P13497 986 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms