RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
SHKBP1-211ENST00000595945 UBIAD1Q9Y5Z9 338 aa16.7■□□□□ 0.26
SHKBP1-211ENST00000595945 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 MEIS1O00470 390 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 BCRP11274 1271 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 PFKFB1P16118 471 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 CCNA1P78396 465 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 MRPS9P82933 396 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 CYP4F22Q6NT55 531 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 DTHD1Q6ZMT9 781 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 CCDC73Q6ZRK6 1079 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 NIPA1Q7RTP0 329 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 FMR1NBQ8N0W7 255 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 CYP2W1Q8TAV3 490 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 PORCNQ9H237 461 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
SHKBP1-211ENST00000595945 DNAJC25-GNG10A0A024R161 153 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 NR1I2O75469 434 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 NDUFA8P51970 172 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 TAF1CQ15572 869 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 DEFB115Q30KQ5 88 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 CEP55Q53EZ4 464 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 PRR16Q569H4 304 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 USP49Q70CQ1 688 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 VSIG10LQ86VR7 867 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 DNERQ8NFT8 737 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 DDX19AQ9NUU7 478 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 ASTN1O14525 1302 aa16.68■□□□□ 0.26
SHKBP1-211ENST00000595945 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 SOWAHBA6NEL2 793 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 MSH4O15457 936 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 NR3C2P08235 984 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 ITGB5P18084 799 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 ZNF76P36508 570 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 CNTN2Q02246 1040 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 CAVIN1Q6NZI2 390 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 C17orf99Q6UX52 265 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 SYMPKQ92797 1274 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 EPSTI1Q96J88 318 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 FGD4Q96M96 766 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
SHKBP1-211ENST00000595945 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 EDNRBP24530 442 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 CCND2P30279 289 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 TXKP42681 527 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 NOGQ13253 232 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 PDIA5Q14554 519 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 PLA2G4DQ86XP0 818 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 SLC5A5Q92911 643 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 AK8Q96MA6 479 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 IWS1Q96ST2 819 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 MMP19Q99542 508 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 JADE2Q9NQC1 790 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
SHKBP1-211ENST00000595945 TLR2O60603 784 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 FCER1AP12319 257 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 ALDH5A1P51649 535 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 SPIRE1Q08AE8 756 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 KCTD2Q14681 263 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 CCDC183Q5T5S1 534 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 TIGD1Q96MW7 591 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 CCSER1Q9C0I3 900 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 CPA4Q9UI42 421 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
SHKBP1-211ENST00000595945 A0A087X0B3 334 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 LOC102724159A0A0B4J2E5 919 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 STRNO43815 780 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 AOC2O75106 756 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 STAM2O75886 525 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 ZNF202O95125 648 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 ARP10275 920 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 TECP42680 631 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 SYKP43405 635 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 PWP2Q15269 919 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
SHKBP1-211ENST00000595945 MORC4Q8TE76 937 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms