RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 TARSL2A2RTX5 802 aaKnown RBP17.03■□□□□ 0.32
ZNF541-205ENST00000595558 LDHCP07864 332 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 OR52Z1P0C646 297 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 ATP2B4P23634 1241 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 SNAP25P60880 206 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
ZNF541-205ENST00000595558 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 CKAP4Q07065 602 aaKnown RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 UBE2SQ16763 222 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 DYMQ7RTS9 669 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 ZSCAN29Q8IWY8 852 aaPredicted RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 ANKS1AQ92625 1134 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 NUP58Q9BVL2 599 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 PPEF1O14829 653 aaPredicted RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 EIF4A3P38919 411 aaKnown RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 TXKP42681 527 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 MAP9Q49MG5 647 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 COL23A1Q86Y22 540 aaPredicted RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 TBCKQ8TEA7 893 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 IFIH1Q9BYX4 1025 aaKnown RBP17.02■□□□□ 0.32
ZNF541-205ENST00000595558 SNX12Q9UMY4 172 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 PCDHA13Q9Y5I0 950 aa17.02■□□□□ 0.32
ZNF541-205ENST00000595558 MYL1P05976 194 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 NEDD1Q8NHV4 660 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
ZNF541-205ENST00000595558 CRACR2AQ9BSW2 395 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 TSPYL1Q9H0U9 437 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 MYMKA6NI61 221 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 EDIL3O43854 480 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 KIF11P52732 1056 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 SPA17Q15506 151 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 SND1Q7KZF4 910 aaKnown RBP eCLIP17.01■□□□□ 0.31
ZNF541-205ENST00000595558 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
ZNF541-205ENST00000595558 SIK3Q9Y2K2 1263 aa17.01■□□□□ 0.31
ZNF541-205ENST00000595558 ANO9A1A5B4 782 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 BICDL2A1A5D9 508 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 BBOX1O75936 387 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 TDP2O95551 362 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 PRPHP41219 470 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 LRRC41Q15345 812 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 TTC19Q6DKK2 380 aaPredicted RBP17■□□□□ 0.31
ZNF541-205ENST00000595558 TMC4Q7Z404 712 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 AENQ8WTP8 325 aaKnown RBP17■□□□□ 0.31
ZNF541-205ENST00000595558 ZNF622Q969S3 477 aaKnown RBP eCLIP17■□□□□ 0.31
ZNF541-205ENST00000595558 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 SH2D4AQ9H788 454 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 PLAGL2Q9UPG8 496 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 LRRC53A6NM62 1247 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 PDHBP11177 359 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 RRAGAQ7L523 313 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 GOLGA6L1Q8N7Z2 621 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 RPGRIP1Q96KN7 1286 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 NDST4Q9H3R1 872 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 SLC37A4O43826 429 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
ZNF541-205ENST00000595558 GNAQP50148 359 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 GRB10Q13322 594 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 NONOQ15233 471 aaKnown RBP eCLIP17■□□□□ 0.31
ZNF541-205ENST00000595558 VWA3BQ502W6 1294 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
ZNF541-205ENST00000595558 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 ZC3H12CQ9C0D7 883 aaKnown RBP17■□□□□ 0.31
ZNF541-205ENST00000595558 JRKLQ9Y4A0 524 aa17■□□□□ 0.31
ZNF541-205ENST00000595558 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 BUB1O43683 1085 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MCM3P25205 808 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 APBA1Q02410 837 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 GFPT1Q06210 699 aaPredicted RBP16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MS4A14Q96JA4 679 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 OSBPL9Q96SU4 736 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MYH1P12882 1939 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MYH10P35580 1976 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 A0A1W2PQJ5 194 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 GOLGA6BA6NDN3 693 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 POTEMA6NI47 508 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 LAD1O00515 517 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 RGL2O15211 777 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 MMP10P09238 476 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 CENPPQ6IPU0 288 aa16.99■□□□□ 0.31
ZNF541-205ENST00000595558 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
ZNF541-205ENST00000595558 AK8Q96MA6 479 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms