RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CHST3Q7LGC8 479 aa26.4■■□□□ 1.82
SSBP4-203ENST00000593641 JMJD4Q9H9V9 463 aa26.4■■□□□ 1.82
SSBP4-203ENST00000593641 PRRC2BQ5JSZ5 2229 aaKnown RBP26.39■■□□□ 1.82
SSBP4-203ENST00000593641 CFBP00751 764 aa26.39■■□□□ 1.82
SSBP4-203ENST00000593641 EIF2AK2P19525 551 aaKnown RBP26.39■■□□□ 1.82
SSBP4-203ENST00000593641 EXOC6Q8TAG9 804 aa26.39■■□□□ 1.82
SSBP4-203ENST00000593641 CAGE1Q8TC20 777 aa26.39■■□□□ 1.82
SSBP4-203ENST00000593641 AMNQ9BXJ7 453 aa26.39■■□□□ 1.82
SSBP4-203ENST00000593641 TSPYL2Q9H2G4 693 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-203ENST00000593641 CA3P07451 260 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 DGKDQ16760 1214 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 SESTD1Q86VW0 696 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 MICALL1Q8N3F8 863 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 IL27Q8NEV9 243 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 PHOSPHO2Q8TCD6 241 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 MRVI1Q9Y6F6 885 aa26.38■■□□□ 1.81
SSBP4-203ENST00000593641 BAZ2BQ9UIF8 2168 aaKnown RBP26.38■■□□□ 1.81
SSBP4-203ENST00000593641 EIF3JO75822 258 aaKnown RBP26.37■■□□□ 1.81
SSBP4-203ENST00000593641 MRPS5P82675 430 aaKnown RBP26.37■■□□□ 1.81
SSBP4-203ENST00000593641 AFAP1L1Q8TED9 768 aa26.37■■□□□ 1.81
SSBP4-203ENST00000593641 ASB2Q96Q27 587 aa26.37■■□□□ 1.81
SSBP4-203ENST00000593641 PXMP2Q9NR77 195 aa26.37■■□□□ 1.81
SSBP4-203ENST00000593641 TNFRSF10AO00220 468 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 BAIAP3O94812 1187 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 NR3C2P08235 984 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 TRDNQ13061 729 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 GDF6Q6KF10 455 aaPredicted RBP26.36■■□□□ 1.81
SSBP4-203ENST00000593641 STAG2Q8N3U4 1231 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 KATNAL1Q9BW62 490 aa26.36■■□□□ 1.81
SSBP4-203ENST00000593641 DDX41Q9UJV9 622 aaKnown RBP26.36■■□□□ 1.81
SSBP4-203ENST00000593641 TRANK1O15050 2925 aa26.35■■□□□ 1.81
SSBP4-203ENST00000593641 KIF28PB7ZC32 967 aa26.35■■□□□ 1.81
SSBP4-203ENST00000593641 KAT2BQ92831 832 aa26.35■■□□□ 1.81
SSBP4-203ENST00000593641 EMID1Q96A84 441 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-203ENST00000593641 KLRF2D3W0D1 207 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 GTPBP6O43824 516 aaPredicted RBP26.34■■□□□ 1.81
SSBP4-203ENST00000593641 KCNJ6P48051 423 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 HSD17B4P51659 736 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 LAMC2Q13753 1193 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 HERC6Q8IVU3 1022 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 C7orf31Q8N865 590 aa26.34■■□□□ 1.81
SSBP4-203ENST00000593641 ZBTB5O15062 677 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 PARNO95453 639 aaKnown RBP26.33■■□□□ 1.81
SSBP4-203ENST00000593641 SEC23AQ15436 765 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 LRRC8DQ7L1W4 858 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 DHX37Q8IY37 1157 aaKnown RBP26.33■■□□□ 1.81
SSBP4-203ENST00000593641 PPTC7Q8NI37 304 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 IL25Q9H293 177 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 MAP3K20Q9NYL2 800 aaKnown RBP26.33■■□□□ 1.81
SSBP4-203ENST00000593641 GTF2IRD1Q9UHL9 959 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 PCDHA1Q9Y5I3 950 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 PTPRSQ13332 1948 aa26.33■■□□□ 1.81
SSBP4-203ENST00000593641 MYCLP12524 364 aaPredicted RBP26.32■■□□□ 1.8
SSBP4-203ENST00000593641 SELPP16109 830 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 PSEN2P49810 448 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 GHRHRQ02643 423 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 SAMD3Q8N6K7 520 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 CTAGE1Q96RT6 745 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 PDCD2LQ9BRP1 358 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 ALG1Q9BT22 464 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 CERS4Q9HA82 394 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 MAD2L2Q9UI95 211 aa26.32■■□□□ 1.8
SSBP4-203ENST00000593641 TCF20Q9UGU0 1960 aaKnown RBP26.31■■□□□ 1.8
SSBP4-203ENST00000593641 REV3LO60673 3130 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 OPLAHO14841 1288 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 ZNF286BP0CG31 522 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 TRAF1Q13077 416 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 MFSD10Q14728 455 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 SKIV2LQ15477 1246 aaKnown RBP26.31■■□□□ 1.8
SSBP4-203ENST00000593641 KCNV1Q6PIU1 500 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 CYB5R4Q7L1T6 521 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 HOMER1Q86YM7 354 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 ADAMTS19Q8TE59 1207 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 MTMR8Q96EF0 704 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 HDAC6Q9UBN7 1215 aa26.31■■□□□ 1.8
SSBP4-203ENST00000593641 ERICH2A1L162 156 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 PALM3A6NDB9 673 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-203ENST00000593641 TLL1O43897 1013 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 F2P00734 622 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 RBL2Q08999 1139 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 KIAA0753Q2KHM9 967 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 RUFY2Q8WXA3 655 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 ARNTL2Q8WYA1 636 aa26.3■■□□□ 1.8
SSBP4-203ENST00000593641 DHX38Q92620 1227 aaKnown RBP26.3■■□□□ 1.8
SSBP4-203ENST00000593641 U3KPZ7 1027 aaPredicted RBP26.3■■□□□ 1.8
SSBP4-203ENST00000593641 RFXAPO00287 272 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 PPP1R11O60927 126 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-203ENST00000593641 CKBP12277 381 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 TAP1Q03518 808 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 TTC22Q5TAA0 569 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 CNKSR3Q6P9H4 555 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 STOX1Q6ZVD7 989 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 UHRF1Q96T88 793 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-203ENST00000593641 XIRP2A4UGR9 3374 aa26.29■■□□□ 1.8
SSBP4-203ENST00000593641 GSPT1P15170 499 aaKnown RBP26.28■■□□□ 1.8
SSBP4-203ENST00000593641 POU3F3P20264 500 aaPredicted RBP26.28■■□□□ 1.8
SSBP4-203ENST00000593641 HOXA13P31271 388 aaPredicted RBP26.28■■□□□ 1.8
SSBP4-203ENST00000593641 WDR5P61964 334 aaKnown RBP26.28■■□□□ 1.8
SSBP4-203ENST00000593641 PGM5Q15124 567 aa26.28■■□□□ 1.8
SSBP4-203ENST00000593641 AAK1Q2M2I8 961 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms