RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 COL6A3P12111 3177 aa15.16■□□□□ 0.02
PRKCSH-218ENST00000593053 MMP3P08254 477 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 RXRAP19793 462 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 PGM5Q15124 567 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 TMTC2Q8N394 836 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 SPZ1Q9BXG8 430 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 LRRC2Q9BYS8 371 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 WNT8AQ9H1J5 351 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 IL23AQ9NPF7 189 aa15.15■□□□□ 0.02
PRKCSH-218ENST00000593053 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 RGS20O76081 388 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 VSIG10LQ86VR7 867 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 ZFP91Q96JP5 570 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 LZTS2Q9BRK4 669 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 TTYH1Q9H313 450 aaPredicted RBP15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 SEMA6BQ9H3T3 888 aa15.14■□□□□ 0.01
PRKCSH-218ENST00000593053 SORBS3O60504 671 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CDC45O75419 566 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 FGBP02675 491 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CALM1P0DP23 149 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CALM2P0DP24 149 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CALM3P0DP25 149 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CCND2P30279 289 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 LIFRP42702 1097 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 GNAQP50148 359 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 LAMC2Q13753 1193 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 DHX37Q8IY37 1157 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CMTR1Q8N1G2 835 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 SLC17A8Q8NDX2 589 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 SCLYQ96I15 445 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 CCDC136Q96JN2 1154 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 SEC63Q9UGP8 760 aaKnown RBP15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
PRKCSH-218ENST00000593053 DNAJB2P25686 324 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 SMARCA1P28370 1054 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 DGKDQ16760 1214 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 KAT2BQ92831 832 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 EMID1Q96A84 441 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 CXXC1Q9P0U4 656 aaPredicted RBP15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 NOD1Q9Y239 953 aa15.12■□□□□ 0.01
PRKCSH-218ENST00000593053 TMEM265A0A087WTH1 108 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 GRXCR1A8MXD5 290 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 GGPS1O95749 300 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 CELF3Q5SZQ8 465 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 KCNV1Q6PIU1 500 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 OTOP2Q7RTS6 562 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 MICU3Q86XE3 530 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 CCDC82Q8N4S0 544 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 PPTC7Q8NI37 304 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 GPKOWQ92917 476 aaPredicted RBP eCLIP15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
PRKCSH-218ENST00000593053 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 ZNF286BP0CG31 522 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 UBA1P22314 1058 aaKnown RBP15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 PSEN2P49810 448 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 SP2Q02086 613 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 PTGISQ16647 500 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 MYSM1Q5VVJ2 828 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 USP17L6PQ6QN14 398 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 SYNE3Q6ZMZ3 975 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 RASEFQ8IZ41 740 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 RETREG2Q8NC44 543 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 CUL5Q93034 780 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 TIFAQ96CG3 184 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 VWCEQ96DN2 955 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 SPATA33Q96N06 139 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 FRMPD4Q14CM0 1322 aa15.1■□□□□ 0.01
PRKCSH-218ENST00000593053 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 MEIS2O14770 477 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 TGFB3P10600 412 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 PBX2P40425 430 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 MFSD10Q14728 455 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 HSDL1Q3SXM5 330 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 GDF6Q6KF10 455 aaPredicted RBP15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
PRKCSH-218ENST00000593053 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms