RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 OTOP2Q7RTS6 562 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 CATIPQ7Z7H3 387 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 MB21D2Q8IYB1 491 aaPredicted RBP15.4■□□□□ 0.06
APOC1-209ENST00000592885 PPTC7Q8NI37 304 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 AFG1LQ8WV93 481 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 SCLYQ96I15 445 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
APOC1-209ENST00000592885 DDX41Q9UJV9 622 aaKnown RBP15.4■□□□□ 0.06
APOC1-209ENST00000592885 NOD1Q9Y239 953 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 MRVI1Q9Y6F6 885 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 SLC4A7Q9Y6M7 1214 aa15.4■□□□□ 0.06
APOC1-209ENST00000592885 SCN5AQ14524 2016 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 PNMA6FA0A0J9YX94 578 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 DDAH1O94760 285 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 ACTN1P12814 892 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 PBX2P40425 430 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 TMEM67Q5HYA8 995 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 HOMER1Q86YM7 354 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 RETREG2Q8NC44 543 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 PIGSQ96S52 555 aa15.39■□□□□ 0.05
APOC1-209ENST00000592885 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
APOC1-209ENST00000592885 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
APOC1-209ENST00000592885 CUL9Q8IWT3 2517 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 GRXCR1A8MXD5 290 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 GCOM1H8Y6P7 765 aaPredicted RBP15.38■□□□□ 0.05
APOC1-209ENST00000592885 STAM2O75886 525 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 PARNO95453 639 aaKnown RBP15.38■□□□□ 0.05
APOC1-209ENST00000592885 F2P00734 622 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 POLR2MP0CAP2 368 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 TGFB3P10600 412 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 HOXD8P13378 290 aaPredicted RBP15.38■□□□□ 0.05
APOC1-209ENST00000592885 SMARCA1P28370 1054 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 CCND2P30279 289 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 ANTXR2P58335 489 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 IRX6P78412 446 aaPredicted RBP15.38■□□□□ 0.05
APOC1-209ENST00000592885 RBL2Q08999 1139 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 PGM5Q15124 567 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 PTGISQ16647 500 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 SLC35G1Q2M3R5 365 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 AFAP1L1Q8TED9 768 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 VWCEQ96DN2 955 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 SLC28A3Q9HAS3 691 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 PCDHA11Q9Y5I1 949 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 FRMPD4Q14CM0 1322 aa15.38■□□□□ 0.05
APOC1-209ENST00000592885 MYH7BA7E2Y1 1941 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 ZBBXA8MT70 800 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 CYTH3O43739 400 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 IQCF3P0C7M6 154 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 KIF5BP33176 963 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 CASC1Q6TDU7 716 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
APOC1-209ENST00000592885 CTCFLQ8NI51 663 aaPredicted RBP15.37■□□□□ 0.05
APOC1-209ENST00000592885 IGDCC4Q8TDY8 1250 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 KAT2BQ92831 832 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 SLC9A7Q96T83 725 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 LZTS2Q9BRK4 669 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 SENP2Q9HC62 589 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 GTF2IRD1Q9UHL9 959 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
APOC1-209ENST00000592885 HAS3O00219 553 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 RGS20O76081 388 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 BAIAP3O94812 1187 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 MYCLP12524 364 aaPredicted RBP15.36■□□□□ 0.05
APOC1-209ENST00000592885 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
APOC1-209ENST00000592885 HOXA13P31271 388 aaPredicted RBP15.36■□□□□ 0.05
APOC1-209ENST00000592885 GNPTABQ3T906 1256 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 ZNF654Q8IZM8 581 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 TMTC2Q8N394 836 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 PHOSPHO2Q8TCD6 241 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 TMEM87BQ96K49 555 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 NKX2-4Q9H2Z4 354 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 LY9Q9HBG7 655 aa15.36■□□□□ 0.05
APOC1-209ENST00000592885 YBX2Q9Y2T7 364 aaKnown RBP15.36■□□□□ 0.05
APOC1-209ENST00000592885 UNC80Q8N2C7 3258 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 BAZ2BQ9UIF8 2168 aaKnown RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 MCM5P33992 734 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 PSEN2P49810 448 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 GNAQP50148 359 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 MFSD10Q14728 455 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 CELF3Q5SZQ8 465 aaKnown RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 MYSM1Q5VVJ2 828 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 GDF6Q6KF10 455 aaPredicted RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 C7orf31Q8N865 590 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 RRP36Q96EU6 259 aaKnown RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
APOC1-209ENST00000592885 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
APOC1-209ENST00000592885 PRC1O43663 620 aa15.34■□□□□ 0.05
APOC1-209ENST00000592885 GGPS1O95749 300 aa15.34■□□□□ 0.05
APOC1-209ENST00000592885 CALM1P0DP23 149 aa15.34■□□□□ 0.05
APOC1-209ENST00000592885 CALM2P0DP24 149 aa15.34■□□□□ 0.05
APOC1-209ENST00000592885 CALM3P0DP25 149 aa15.34■□□□□ 0.05
APOC1-209ENST00000592885 SELPP16109 830 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms