RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-215	ENST00000592435	C16orf59	Q7L2K0	433 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	SGMS1	Q86VZ5	419 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	SRBD1	Q8N5C6	995 aa	Known RBP	11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	AFG1L	Q8WV93	481 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	MYL10	Q9BUA6	226 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	NOC4L	Q9BVI4	516 aa	Known RBP	11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	PPP1R12C	Q9BZL4	782 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	SLC12A7	Q9Y666	1083 aa		11.22	□□□□□ -0.61
PRKCSH-215	ENST00000592435	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	RGS20	O76081	388 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	MYCL	P12524	364 aa	Predicted RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	CAST	P20810	708 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	CCND2	P30279	289 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	EXOSC10	Q01780	885 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	KRT32	Q14532	448 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	DGKD	Q16760	1214 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	RASIP1	Q5U651	963 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	DHX32	Q7L7V1	743 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	FCHSD1	Q86WN1	690 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	DHX37	Q8IY37	1157 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	FANCB	Q8NB91	859 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	NEK1	Q96PY6	1258 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	IL23A	Q9NPF7	189 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	SEC63	Q9UGP8	760 aa	Known RBP	11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	STXBP5L	Q9Y2K9	1186 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	MRVI1	Q9Y6F6	885 aa		11.21	□□□□□ -0.61
PRKCSH-215	ENST00000592435	PIK3CD	O00329	1044 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PPFIA4	O75335	1185 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	STAM2	O75886	525 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MMP3	P08254	477 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	HMGB1	P09429	215 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ZNF697	Q5TEC3	545 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MYSM1	Q5VVJ2	828 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SYNE3	Q6ZMZ3	975 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ZNF365	Q70YC5	407 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SESTD1	Q86VW0	696 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RPUSD2	Q8IZ73	545 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PPTC7	Q8NI37	304 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PIBF1	Q8WXW3	757 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SEMA6B	Q9H3T3	888 aa		11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	TRMT13	Q9NUP7	481 aa	Known RBP	11.2	□□□□□ -0.62
PRKCSH-215	ENST00000592435	FRMPD4	Q14CM0	1322 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	UMODL1	Q5DID0	1318 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	TMEM265	A0A087WTH1	108 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PITPNM1	O00562	1244 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MEIS2	O14770	477 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PLEKHA8P1	O95397	391 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	FGB	P02675	491 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ACR	P10323	421 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CYP2C9	P11712	490 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	HOXD8	P13378	290 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CCL23	P55773	120 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	FAM47C	Q5HY64	1035 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CELF3	Q5SZQ8	465 aa	Known RBP	11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	XRRA1	Q6P2D8	792 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	APOA5	Q6Q788	366 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RASEF	Q8IZ41	740 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	IL31RA	Q8NI17	732 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	HERVK_113	Q902F9	699 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	KAT2B	Q92831	832 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	INPP4A	Q96PE3	977 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	LRRC2	Q9BYS8	371 aa		11.19	□□□□□ -0.62
PRKCSH-215	ENST00000592435	COL6A3	P12111	3177 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SPATA31C2	B4DYI2	1134 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PFKM	P08237	780 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RXRA	P19793	462 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ICAM3	P32942	547 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MRPS9	P82933	396 aa	Known RBP	11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SP2	Q02086	613 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ADCK5	Q3MIX3	580 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	HSDL1	Q3SXM5	330 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	GNPTAB	Q3T906	1256 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	USP17L6P	Q6QN14	398 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	TMTC3	Q6ZXV5	915 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	TEX2	Q8IWB9	1127 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CMTR1	Q8N1G2	835 aa	Known RBP	11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CCDC82	Q8N4S0	544 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	SMARCC2	Q8TAQ2	1214 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	KCNB2	Q92953	911 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	CUL5	Q93034	780 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	GUCD1	Q96NT3	240 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	KATNAL1	Q9BW62	490 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	WNT8A	Q9H1J5	351 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MTIF3	Q9H2K0	278 aa	Known RBP	11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PSTPIP2	Q9H939	334 aa		11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RBM28	Q9NW13	759 aa	Known RBP	11.18	□□□□□ -0.62
PRKCSH-215	ENST00000592435	HAS3	O00219	553 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	ZBTB43	O43298	467 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	GGPS1	O95749	300 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	F2	P00734	622 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RFC2	P35250	354 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RCAN1	P53805	252 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	BFSP2	Q13515	415 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	PCNX4	Q63HM2	1172 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	MICU3	Q86XE3	530 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	C7orf31	Q8N865	590 aa		11.17	□□□□□ -0.62
PRKCSH-215	ENST00000592435	RETREG2	Q8NC44	543 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms