RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 REXO1Q8N1G1 1221 aaKnown RBP11.14□□□□□ -0.63
TPM4-215ENST00000592138 SCFD2Q8WU76 684 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 SNX21Q969T3 373 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 DEFB118Q96PH6 123 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PHF20Q9BVI0 1012 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PCDHA6Q9UN73 950 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PCDHA4Q9UN74 947 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 Q9Y3F1 56 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 PCDHA8Q9Y5H6 950 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
TPM4-215ENST00000592138 ZNFX1Q9P2E3 1918 aaKnown RBP11.13□□□□□ -0.63
TPM4-215ENST00000592138 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
TPM4-215ENST00000592138 M0R2N6 131 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM4-215ENST00000592138 JAK2O60674 1132 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 PPFIA3O75145 1194 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 RARBP10826 455 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 CNGA1P29973 690 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 SREBF1P36956 1147 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 NLRP5P59047 1200 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 NPY5RQ15761 445 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 FBXO16Q8IX29 292 aaPredicted RBP11.13□□□□□ -0.63
TPM4-215ENST00000592138 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
TPM4-215ENST00000592138 ALG1Q9BT22 464 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
TPM4-215ENST00000592138 KIF3AQ9Y496 699 aa11.13□□□□□ -0.63
TPM4-215ENST00000592138 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 MYCP01106 439 aaPredicted RBP11.12□□□□□ -0.63
TPM4-215ENST00000592138 TGFB3P10600 412 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
TPM4-215ENST00000592138 ICAM3P32942 547 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 GJA9P57773 515 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 MRPS9P82933 396 aaKnown RBP11.12□□□□□ -0.63
TPM4-215ENST00000592138 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 CUL4AQ13619 759 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 DUSP28Q4G0W2 176 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 ARRDC4Q8NCT1 418 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
TPM4-215ENST00000592138 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.12□□□□□ -0.63
TPM4-215ENST00000592138 UNC80Q8N2C7 3258 aa11.12□□□□□ -0.63
TPM4-215ENST00000592138 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 DNM1LO00429 736 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 MAFGO15525 162 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 ADCY6O43306 1168 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 RGS20O76081 388 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 CYP3A4P08684 503 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 MYCLP12524 364 aaPredicted RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 TRIM29Q14134 588 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 CCDC62Q6P9F0 684 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 FAM184AQ8NB25 1140 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 INTS4Q96HW7 963 aaKnown RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 WDR11Q9BZH6 1224 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 PDGFCQ9NRA1 345 aa11.11□□□□□ -0.63
TPM4-215ENST00000592138 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
TPM4-215ENST00000592138 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
TPM4-215ENST00000592138 SPATA31C2B4DYI2 1134 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 FIBPO43427 364 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 MMP1P03956 469 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 SMPD1P17405 629 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 EN2P19622 333 aaPredicted RBP11.1□□□□□ -0.63
TPM4-215ENST00000592138 CIITAP33076 1130 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 USP11P51784 963 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 JAKMIP3Q5VZ66 844 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 RNF180Q86T96 592 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 SENP7Q9BQF6 1050 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
TPM4-215ENST00000592138 TMEM260Q9NX78 707 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
TPM4-215ENST00000592138 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 MRVI1Q9Y6F6 885 aa11.1□□□□□ -0.63
TPM4-215ENST00000592138 VCANP13611 3396 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms