RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 IFIT3O14879 490 aaKnown RBP20.81■□□□□ 0.92
VAT1-208ENST00000590924 PRC1O43663 620 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 ARIH2O95376 493 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 PBX2P40425 430 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 ANTXR2P58335 489 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 NFRKBQ6P4R8 1299 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 CCDC62Q6P9F0 684 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 IWS1Q96ST2 819 aa20.81■□□□□ 0.92
VAT1-208ENST00000590924 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
VAT1-208ENST00000590924 CXXC1Q9P0U4 656 aaPredicted RBP20.81■□□□□ 0.92
VAT1-208ENST00000590924 PTPRSQ13332 1948 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 RAB30Q15771 203 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 BLOC1S2Q6QNY1 142 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 RPUSD2Q8IZ73 545 aaKnown RBP20.8■□□□□ 0.92
VAT1-208ENST00000590924 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 MTMR8Q96EF0 704 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 JAKMIP1Q96N16 626 aaKnown RBP20.8■□□□□ 0.92
VAT1-208ENST00000590924 RMDN3Q96TC7 470 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 COL25A1Q9BXS0 654 aaPredicted RBP20.8■□□□□ 0.92
VAT1-208ENST00000590924 ZSWIM6Q9HCJ5 1215 aa20.8■□□□□ 0.92
VAT1-208ENST00000590924 PFKMP08237 780 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 CYP2C9P11712 490 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 LIFRP42702 1097 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 GHRHRQ02643 423 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 PTPN11Q06124 597 aaPredicted RBP20.79■□□□□ 0.92
VAT1-208ENST00000590924 STXBP2Q15833 593 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 FAM47CQ5HY64 1035 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 FBXL16Q8N461 479 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 VWCEQ96DN2 955 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 SCLYQ96I15 445 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 AMNQ9BXJ7 453 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 VAT1LQ9HCJ6 419 aa20.79■□□□□ 0.92
VAT1-208ENST00000590924 VCANP13611 3396 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 DOCK5Q9H7D0 1870 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 KLRF2D3W0D1 207 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 GH1P01241 217 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 WTAPQ15007 396 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 TMEM67Q5HYA8 995 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 MAD2L2Q9UI95 211 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 MSRAQ9UJ68 235 aa20.78■□□□□ 0.92
VAT1-208ENST00000590924 CHD9Q3L8U1 2897 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 PALM3A6NDB9 673 aaPredicted RBP20.77■□□□□ 0.92
VAT1-208ENST00000590924 PITPNM1O00562 1244 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 OPLAHO14841 1288 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 CFBP00751 764 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 RBM25P49756 843 aaKnown RBP20.77■□□□□ 0.92
VAT1-208ENST00000590924 HSD17B4P51659 736 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 ARHGAP1Q07960 439 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 ARHGEF16Q5VV41 709 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 SEPT14Q6ZU15 432 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 CHST3Q7LGC8 479 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 AFG1LQ8WV93 481 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 C22orf23Q9BZE7 217 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 PXMP2Q9NR77 195 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 MAP3K20Q9NYL2 800 aaKnown RBP20.77■□□□□ 0.92
VAT1-208ENST00000590924 CYP46A1Q9Y6A2 500 aa20.77■□□□□ 0.92
VAT1-208ENST00000590924 SH2B2O14492 632 aaPredicted RBP20.76■□□□□ 0.91
VAT1-208ENST00000590924 ZBTB5O15062 677 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 MMP3P08254 477 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 CASTP20810 708 aaKnown RBP20.76■□□□□ 0.91
VAT1-208ENST00000590924 RPS6KB1P23443 525 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 LY6KQ17RY6 165 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 SAMD3Q8N6K7 520 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 GAS2L1Q99501 681 aaPredicted RBP20.76■□□□□ 0.91
VAT1-208ENST00000590924 LY9Q9HBG7 655 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 SLC4A7Q9Y6M7 1214 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 CHD7Q9P2D1 2997 aa20.76■□□□□ 0.91
VAT1-208ENST00000590924 PPP1R11O60927 126 aaPredicted RBP20.75■□□□□ 0.91
VAT1-208ENST00000590924 EIF3JO75822 258 aaKnown RBP20.75■□□□□ 0.91
VAT1-208ENST00000590924 NR3C2P08235 984 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 EIF2AK2P19525 551 aaKnown RBP20.75■□□□□ 0.91
VAT1-208ENST00000590924 RFC2P35250 354 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 COL9A3Q14050 684 aaPredicted RBP20.75■□□□□ 0.91
VAT1-208ENST00000590924 GRM4Q14833 912 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 SESTD1Q86VW0 696 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 SGMS1Q86VZ5 419 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 EMID1Q96A84 441 aaPredicted RBP20.75■□□□□ 0.91
VAT1-208ENST00000590924 KAT6AQ92794 2004 aa20.75■□□□□ 0.91
VAT1-208ENST00000590924 PPP1R13LQ8WUF5 828 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 MAP3K14Q99558 947 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 AGXT2Q9BYV1 514 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 NKX2-4Q9H2Z4 354 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 RIOX1Q9H6W3 641 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 DDX41Q9UJV9 622 aaKnown RBP20.74■□□□□ 0.91
VAT1-208ENST00000590924 YBX2Q9Y2T7 364 aaKnown RBP20.74■□□□□ 0.91
VAT1-208ENST00000590924 PCDHA1Q9Y5I3 950 aa20.74■□□□□ 0.91
VAT1-208ENST00000590924 IQCF3P0C7M6 154 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 TRAF1Q13077 416 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 BFSP2Q13515 415 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 SLC35G1Q2M3R5 365 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 DEFB128Q7Z7B8 93 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 CATIPQ7Z7H3 387 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 USP38Q8NB14 1042 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 PDCD2LQ9BRP1 358 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 PRDM12Q9H4Q4 367 aa20.73■□□□□ 0.91
VAT1-208ENST00000590924 SLC28A3Q9HAS3 691 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms