RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 SMCO2A6NFE2 343 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 ZSCAN22P10073 491 aaPredicted RBP18.99■□□□□ 0.63
GCDH-213ENST00000590627 FOSBP53539 338 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 GUCY1B3Q02153 619 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
GCDH-213ENST00000590627 USH1GQ495M9 461 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 SNRNP48Q6IEG0 339 aaKnown RBP18.99■□□□□ 0.63
GCDH-213ENST00000590627 FERMT2Q96AC1 680 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 PSTPIP2Q9H939 334 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 C6orf50Q9HD87 102 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 RIC8AQ9NPQ8 531 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
GCDH-213ENST00000590627 PDLIM7Q9NR12 457 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 PCDHA4Q9UN74 947 aa18.99■□□□□ 0.63
GCDH-213ENST00000590627 M0R2N6 131 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 OPLAHO14841 1288 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 ZNF865P0CJ78 1059 aaPredicted RBP18.98■□□□□ 0.63
GCDH-213ENST00000590627 AKR1A1P14550 325 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 ADCY7P51828 1080 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 MRPL12P52815 198 aaKnown RBP18.98■□□□□ 0.63
GCDH-213ENST00000590627 GHRHRQ02643 423 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 SAMD3Q8N6K7 520 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 BICD2Q8TD16 824 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 CLEC4DQ8WXI8 215 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 FOXP1Q9H334 677 aaPredicted RBP18.98■□□□□ 0.63
GCDH-213ENST00000590627 BRMS1Q9HCU9 246 aa18.98■□□□□ 0.63
GCDH-213ENST00000590627 PIK3CDO00329 1044 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 U2AF2P26368 475 aaKnown RBP eCLIP18.97■□□□□ 0.633e-8■□□□□ 10.2
GCDH-213ENST00000590627 KRT2P35908 639 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
GCDH-213ENST00000590627 DIS3L2Q8IYB7 885 aaKnown RBP18.97■□□□□ 0.63
GCDH-213ENST00000590627 BLIDQ8IZY5 108 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 CHST13Q8NET6 341 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 CUL5Q93034 780 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 RIPK3Q9Y572 518 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
GCDH-213ENST00000590627 BTBD18B2RXH4 712 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 ALAS1P13196 640 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 TAL1P17542 331 aaPredicted RBP18.96■□□□□ 0.63
GCDH-213ENST00000590627 TLE2Q04725 743 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 SHHQ15465 462 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 MCF2L2Q86YR7 1114 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 BADQ92934 168 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 TNFRSF25Q93038 417 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 TRERF1Q96PN7 1200 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 TSEN34Q9BSV6 310 aaKnown RBP18.96■□□□□ 0.63
GCDH-213ENST00000590627 ZSCAN16Q9H4T2 348 aaPredicted RBP18.96■□□□□ 0.63
GCDH-213ENST00000590627 RNF146Q9NTX7 359 aa18.96■□□□□ 0.63
GCDH-213ENST00000590627 MAP3K20Q9NYL2 800 aaKnown RBP18.96■□□□□ 0.63
GCDH-213ENST00000590627 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 MEIS2O14770 477 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 ADAMTS4O75173 837 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 F13A1P00488 732 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 PGK1P00558 417 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 CLK2P49760 499 aaKnown RBP18.95■□□□□ 0.62
GCDH-213ENST00000590627 RESTQ13127 1097 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 ZNF697Q5TEC3 545 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 SH3RF1Q7Z6J0 888 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 ZNF467Q7Z7K2 595 aaPredicted RBP18.95■□□□□ 0.62
GCDH-213ENST00000590627 OXER1Q8TDS5 423 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 TRIM43Q96BQ3 446 aaPredicted RBP18.95■□□□□ 0.62
GCDH-213ENST00000590627 FBXO40Q9UH90 709 aa18.95■□□□□ 0.62
GCDH-213ENST00000590627 A0A1W2PQ45 241 aaPredicted RBP18.94■□□□□ 0.62
GCDH-213ENST00000590627 A0A1W2PQY0 241 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 GCOM1H8Y6P7 765 aaPredicted RBP18.94■□□□□ 0.62
GCDH-213ENST00000590627 NFIBO00712 420 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 ADAMTS3O15072 1205 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 CLTBP09497 229 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 POLR2MP0CAP2 368 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 HSD17B4P51659 736 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 C9orf50Q5SZB4 431 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 MCTP1Q6DN14 999 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 BRAPQ7Z569 592 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 NOSTRINQ8IVI9 506 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 REXO1Q8N1G1 1221 aaKnown RBP18.94■□□□□ 0.62
GCDH-213ENST00000590627 GUCD1Q96NT3 240 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 FAM184BQ9ULE4 1060 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 PCDHA6Q9UN73 950 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 PCDHA8Q9Y5H6 950 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 UNC80Q8N2C7 3258 aa18.94■□□□□ 0.62
GCDH-213ENST00000590627 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
GCDH-213ENST00000590627 SNAI1O95863 264 aaPredicted RBP18.93■□□□□ 0.62
GCDH-213ENST00000590627 NR5A1Q13285 461 aa18.93■□□□□ 0.62
GCDH-213ENST00000590627 FERMT3Q86UX7 667 aa18.93■□□□□ 0.62
GCDH-213ENST00000590627 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
GCDH-213ENST00000590627 MOXD2PA6NHM9 499 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 FOSP01100 380 aaPredicted RBP18.92■□□□□ 0.62
GCDH-213ENST00000590627 SMAD3P84022 425 aaKnown RBP18.92■□□□□ 0.62
GCDH-213ENST00000590627 AP3B2Q13367 1082 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 GNL2Q13823 731 aaKnown RBP18.92■□□□□ 0.62
GCDH-213ENST00000590627 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 KRT25Q7Z3Z0 450 aa18.92■□□□□ 0.62
GCDH-213ENST00000590627 KLHDC9Q8NEP7 349 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms