RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 UNC13DQ70J99 1090 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 BARHL2Q9NY43 387 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 PCDHA6Q9UN73 950 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 PCDHA8Q9Y5H6 950 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 APBA1Q02410 837 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 USP17L5A8MUK1 530 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 TOB1P50616 345 aaPredicted RBP18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 DENND2CQ68D51 928 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 KNDC1Q76NI1 1749 aa18.79■□□□□ 0.6
SMARCA4-215ENST00000590574 NAA35Q5VZE5 725 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 IKBKGQ9Y6K9 419 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 LRRC53A6NM62 1247 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 MEIS1O00470 390 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 SYNCQ9H7C4 482 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 BZW2Q9Y6E2 419 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 ITIH6Q6UXX5 1313 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 AFPP02771 609 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 SMTNP53814 917 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 A0A1W2PQC6 194 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 GYPCP04921 128 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 FCER1AP12319 257 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 GCFC2P16383 781 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 ICA1Q05084 483 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 TBC1D9BQ66K14 1250 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 FBXL16Q8N461 479 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 KIFC2Q96AC6 838 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 NSUN4Q96CB9 384 aaKnown RBP18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
SMARCA4-215ENST00000590574 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 PLA2G4BP0C869 781 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 ASIC3Q9UHC3 531 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 RABGAP1Q9Y3P9 1069 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 ANO9A1A5B4 782 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 GGCXP38435 758 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 PLCB1Q9NQ66 1216 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 USP14P54578 494 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 CLUL1Q15846 466 aa18.77■□□□□ 0.6
SMARCA4-215ENST00000590574 CYP2C19P33261 490 aa18.77■□□□□ 0.59
SMARCA4-215ENST00000590574 BIRC3Q13489 604 aa18.77■□□□□ 0.59
SMARCA4-215ENST00000590574 GRAPQ13588 217 aa18.77■□□□□ 0.59
SMARCA4-215ENST00000590574 GRAPLQ8TC17 118 aaPredicted RBP18.77■□□□□ 0.59
SMARCA4-215ENST00000590574 TRIM10Q9UDY6 481 aa18.77■□□□□ 0.59
SMARCA4-215ENST00000590574 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 GFPT1Q06210 699 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 SF3B2Q13435 895 aaKnown RBP18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 KIAA0825Q8IV33 1275 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 TCHPQ9BT92 498 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 PPP1R3GB7ZBB8 358 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 NNTQ13423 1086 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 FAM178BQ8IXR5 827 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 RNF14Q9UBS8 474 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 ATP5DP30049 168 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 WDR44Q5JSH3 913 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 MCTP2Q6DN12 878 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 FAM212AQ96EL1 285 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 STIM2Q9P246 746 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 NTRK3Q16288 839 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 ANKRD40Q6AI12 368 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 NKIRAS1Q9NYS0 192 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 SERPINB13Q9UIV8 391 aa18.76■□□□□ 0.59
SMARCA4-215ENST00000590574 CLIC2O15247 247 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 KCNB1Q14721 858 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 SEPT2Q15019 361 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 ADSSL1Q8N142 457 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 EXOC7Q9UPT5 735 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 NT5C2P49902 561 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 FNBP1Q96RU3 617 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 ADAMTS1Q9UHI8 967 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 EIF3CLB5ME19 914 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 MYCLP12524 364 aaPredicted RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 NFRKBQ6P4R8 1299 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 EIF3CQ99613 913 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 NFU1Q9UMS0 254 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 CD44P16070 742 aaKnown RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 H2AFXP16104 143 aaPredicted RBP18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 RAD54LQ92698 747 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 AMNQ9BXJ7 453 aa18.75■□□□□ 0.59
SMARCA4-215ENST00000590574 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 ALS2CLQ60I27 953 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 TAOK1Q7L7X3 1001 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 BACH1O14867 736 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 RGS16O15492 202 aaPredicted RBP18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 NCK2O43639 380 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 USP21Q9UK80 565 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 PALMO75781 387 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 WDR78Q5VTH9 848 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 LRRN4CLQ8ND94 238 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 PEAK1Q9H792 1746 aa18.74■□□□□ 0.59
SMARCA4-215ENST00000590574 CNTNAP5Q8WYK1 1306 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms