RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TTLL4Q14679 1199 aa24.4■■□□□ 1.5
ATG4D-212ENST00000590096 RNF180Q86T96 592 aa24.4■■□□□ 1.5
ATG4D-212ENST00000590096 FAM177A1Q8N128 213 aaPredicted RBP24.4■■□□□ 1.5
ATG4D-212ENST00000590096 SYNRGQ9UMZ2 1314 aa24.39■■□□□ 1.5
ATG4D-212ENST00000590096 KBTBD13C9JR72 458 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 STAM2O75886 525 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 PGK1P00558 417 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 SMPD1P17405 629 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 ST3GAL1Q11201 340 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 DUSP28Q4G0W2 176 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 MCTP2Q6DN12 878 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 XRRA1Q6P2D8 792 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 TLK2Q86UE8 772 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 REXO1Q8N1G1 1221 aaKnown RBP24.39■■□□□ 1.49
ATG4D-212ENST00000590096 AIFM3Q96NN9 605 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 ANO3Q9BYT9 981 aa24.39■■□□□ 1.49
ATG4D-212ENST00000590096 DNM1LO00429 736 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 NKRFO15226 690 aaKnown RBP eCLIP24.38■■□□□ 1.49
ATG4D-212ENST00000590096 DTNBO60941 627 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 CLK2P49760 499 aaKnown RBP24.38■■□□□ 1.49
ATG4D-212ENST00000590096 LRRC41Q15345 812 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 GNPTABQ3T906 1256 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 GJC2Q5T442 439 aaPredicted RBP24.38■■□□□ 1.49
ATG4D-212ENST00000590096 JAKMIP3Q5VZ66 844 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 PCNX4Q63HM2 1172 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 NECAB2Q7Z6G3 386 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 PGBD1Q96JS3 809 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 LLPHQ9BRT6 129 aaKnown RBP24.38■■□□□ 1.49
ATG4D-212ENST00000590096 AP5M1Q9H0R1 490 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 GNEQ9Y223 722 aaKnown RBP24.38■■□□□ 1.49
ATG4D-212ENST00000590096 Q9Y3F1 56 aa24.38■■□□□ 1.49
ATG4D-212ENST00000590096 MKI67P46013 3256 aaKnown RBP24.37■■□□□ 1.49
ATG4D-212ENST00000590096 JAK2O60674 1132 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 ADAMTS4O75173 837 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 C6orf222P0C671 652 aaPredicted RBP24.37■■□□□ 1.49
ATG4D-212ENST00000590096 TXNP10599 105 aaKnown RBP24.37■■□□□ 1.49
ATG4D-212ENST00000590096 GJA9P57773 515 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 DIS3LQ8TF46 1054 aaKnown RBP24.37■■□□□ 1.49
ATG4D-212ENST00000590096 PAWRQ96IZ0 340 aaKnown RBP24.37■■□□□ 1.49
ATG4D-212ENST00000590096 ALG1Q9BT22 464 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 TMEM260Q9NX78 707 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 MRVI1Q9Y6F6 885 aa24.37■■□□□ 1.49
ATG4D-212ENST00000590096 DYNC1LI2O43237 492 aaPredicted RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 CD2BP2O95400 341 aaKnown RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 FDPSP14324 419 aaKnown RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 MNX1P50219 401 aaPredicted RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 MRPS9P82933 396 aaKnown RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 GALNT17Q6IS24 598 aa24.36■■□□□ 1.49
ATG4D-212ENST00000590096 KCNV1Q6PIU1 500 aa24.36■■□□□ 1.49
ATG4D-212ENST00000590096 UBE2Q1Q7Z7E8 422 aa24.36■■□□□ 1.49
ATG4D-212ENST00000590096 ZFP91Q96JP5 570 aaPredicted RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 UPF3AQ9H1J1 476 aaKnown RBP24.36■■□□□ 1.49
ATG4D-212ENST00000590096 PCDHA4Q9UN74 947 aa24.36■■□□□ 1.49
ATG4D-212ENST00000590096 TMEM63BQ5T3F8 832 aa24.35■■□□□ 1.49
ATG4D-212ENST00000590096 TMX3Q96JJ7 454 aa24.35■■□□□ 1.49
ATG4D-212ENST00000590096 C11orf49Q9H6J7 331 aa24.35■■□□□ 1.49
ATG4D-212ENST00000590096 RTEL1Q9NZ71 1219 aa24.35■■□□□ 1.49
ATG4D-212ENST00000590096 RGS20O76081 388 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 ARIH2O95376 493 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 HMGN5P82970 282 aaKnown RBP24.34■■□□□ 1.49
ATG4D-212ENST00000590096 CCDC62Q6P9F0 684 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 NLRX1Q86UT6 975 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 BLIDQ8IZY5 108 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 PCSK9Q8NBP7 692 aaKnown RBP24.34■■□□□ 1.49
ATG4D-212ENST00000590096 OR6J1Q8NGC5 347 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 INPP4AQ96PE3 977 aaPredicted RBP24.34■■□□□ 1.49
ATG4D-212ENST00000590096 KCNJ14Q9UNX9 436 aa24.34■■□□□ 1.49
ATG4D-212ENST00000590096 CST5P28325 142 aaPredicted RBP24.33■■□□□ 1.49
ATG4D-212ENST00000590096 SREBF1P36956 1147 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 TRIM29Q14134 588 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 LY6KQ17RY6 165 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 GNASQ5JWF2 1037 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 DAGLBQ8NCG7 672 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 KLHDC9Q8NEP7 349 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 RASGRP4Q8TDF6 673 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 TSEN34Q9BSV6 310 aaKnown RBP24.33■■□□□ 1.49
ATG4D-212ENST00000590096 PHF20Q9BVI0 1012 aa24.33■■□□□ 1.49
ATG4D-212ENST00000590096 DDX41Q9UJV9 622 aaKnown RBP24.33■■□□□ 1.49
ATG4D-212ENST00000590096 MYADML2A6NDP7 307 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 ADAMTS3O15072 1205 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 ZEB2O60315 1214 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 GH1P01241 217 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 TGFB3P10600 412 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 PTGS1P23219 599 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 FSCN1Q16658 493 aaKnown RBP24.32■■□□□ 1.48
ATG4D-212ENST00000590096 BRDTQ58F21 947 aaPredicted RBP24.32■■□□□ 1.48
ATG4D-212ENST00000590096 COPS5Q92905 334 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 HTATIP2Q9BUP3 242 aa24.32■■□□□ 1.48
ATG4D-212ENST00000590096 MOXD2PA6NHM9 499 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 FIBPO43427 364 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 COL6A1P12109 1028 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 ZNF76P36508 570 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 CPT1AP50416 773 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 NKX3-2P78367 333 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 BEX3Q00994 111 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 KCNA10Q16322 511 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 PRPF38BQ5VTL8 546 aaKnown RBP24.31■■□□□ 1.48
ATG4D-212ENST00000590096 FAM184AQ8NB25 1140 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 GPRASP2Q96D09 838 aa24.31■■□□□ 1.48
ATG4D-212ENST00000590096 CDHR1Q96JP9 859 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms