RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	DUSP11	O75319	330 aa	Known RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	EIF3J	O75822	258 aa	Known RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	RGS20	O76081	388 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	FARP2	O94887	1054 aa	Predicted RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	GNA11	P29992	359 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	CLK2	P49760	499 aa	Known RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	LRRC41	Q15345	812 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	CCDC148	Q8NFR7	591 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	PAWR	Q96IZ0	340 aa	Known RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	TMX3	Q96JJ7	454 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	SH3GLB2	Q9NR46	395 aa		13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	GNE	Q9Y223	722 aa	Known RBP	13.66	□□□□□ -0.22
RFX2-215	ENST00000589742	FRMPD4	Q14CM0	1322 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	TXN	P10599	105 aa	Known RBP	13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	RGS19	P49795	217 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	LY6K	Q17RY6	165 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	ARRDC4	Q8NCT1	418 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	SCFD2	Q8WU76	684 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	ANO3	Q9BYT9	981 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	GLT8D2	Q9H1C3	349 aa		13.65	□□□□□ -0.22
RFX2-215	ENST00000589742	SYNRG	Q9UMZ2	1314 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	SORBS3	O60504	671 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	ADAMTS4	O75173	837 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	FOS	P01100	380 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	C6orf222	P0C671	652 aa	Predicted RBP	13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	GJA9	P57773	515 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	BEX3	Q00994	111 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	TTLL4	Q14679	1199 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	DUSP28	Q4G0W2	176 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	PCNX4	Q63HM2	1172 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	CCDC62	Q6P9F0	684 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	TLK2	Q86UE8	772 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	BLID	Q8IZY5	108 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	REXO1	Q8N1G1	1221 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	WASF1	Q92558	559 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	DDX41	Q9UJV9	622 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	PCDHA4	Q9UN74	947 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	MRVI1	Q9Y6F6	885 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	LRRC37A2	A6NM11	1700 aa		13.64	□□□□□ -0.23
RFX2-215	ENST00000589742	CTAGE5	O15320	804 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	XBP1	P17861	261 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	MCM2	P49736	904 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	AP3B2	Q13367	1082 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	NPY5R	Q15761	445 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	NECAB2	Q7Z6G3	386 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	UBE2Q1	Q7Z7E8	422 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	RNF180	Q86T96	592 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	ANKLE1	Q8NAG6	615 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	KLHDC9	Q8NEP7	349 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	IL27	Q8NEV9	243 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	OR6J1	Q8NGC5	347 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	BICD2	Q8TD16	824 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	FERMT2	Q96AC1	680 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	LLPH	Q9BRT6	129 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	PHF20	Q9BVI0	1012 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	AP5M1	Q9H0R1	490 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	UPF3A	Q9H1J1	476 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	BCAS3	Q9H6U6	928 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	EHMT1	Q9H9B1	1298 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	SPC25	Q9HBM1	224 aa		13.63	□□□□□ -0.23
RFX2-215	ENST00000589742	KBTBD13	C9JR72	458 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	DNM1L	O00429	736 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	CAPN2	P17655	700 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	ITGB5	P18084	799 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	SREBF1	P36956	1147 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	SP2	Q02086	613 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	GUCY1B3	Q02153	619 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	SEMA3F	Q13275	785 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	KCNA10	Q16322	511 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	GNAS	Q5JWF2	1037 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	CYP2W1	Q8TAV3	490 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	OXER1	Q8TDS5	423 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	INPP4A	Q96PE3	977 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	C11orf49	Q9H6J7	331 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742		Q9Y3F1	56 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	UBIAD1	Q9Y5Z9	338 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	FRMPD3	Q5JV73	1810 aa		13.62	□□□□□ -0.23
RFX2-215	ENST00000589742	KIAA1217	Q5T5P2	1943 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	SPATA31C2	B4DYI2	1134 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742		M0R2N6	131 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	NKRF	O15226	690 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	EDIL3	O43854	480 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	STAM2	O75886	525 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	GH1	P01241	217 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	ICAM3	P32942	547 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	ZNF76	P36508	570 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	ARHGAP4	P98171	946 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	FSCN1	Q16658	493 aa	Known RBP	13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	GNPTAB	Q3T906	1256 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	KRT40	Q6A162	431 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	XRRA1	Q6P2D8	792 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	NLRX1	Q86UT6	975 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	TEX2	Q8IWB9	1127 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	FAM184A	Q8NB25	1140 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	DAGLB	Q8NCG7	672 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	UIMC1	Q96RL1	719 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	MXRA8	Q9BRK3	442 aa		13.61	□□□□□ -0.23
RFX2-215	ENST00000589742	JADE2	Q9NQC1	790 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms