RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-209ENST00000589318 CDC25BP30305 580 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CIITAP33076 1130 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 MORC3Q14149 939 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CABP7Q86V35 215 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 AOPEPQ8N6M6 819 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
DDX39A-209ENST00000589318 STAMQ92783 540 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 GJA10Q969M2 543 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 FAM86B1E9PN63 330 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CYP3A4P08684 503 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 FAM86B2P0C5J1 330 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 STAT6P42226 847 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 PDIA5Q14554 519 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 BMS1Q14692 1282 aaKnown RBP17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 WNK4Q96J92 1243 aa17.29■□□□□ 0.36
DDX39A-209ENST00000589318 POTEMA6NI47 508 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-209ENST00000589318 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 PLCG1P19174 1290 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 PTGS1P23219 599 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 GHRHRQ02643 423 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 NCAPHQ15003 741 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 Q4G0T1 1027 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 FCHSD1Q86WN1 690 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 ETNPPLQ8TBG4 499 aa17.28■□□□□ 0.36
DDX39A-209ENST00000589318 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 HSD17B4P51659 736 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 TMEM266Q2M3C6 531 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 CEP135Q66GS9 1140 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 SPC24Q8NBT2 197 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 ATG4CQ96DT6 458 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 PLIN2Q99541 437 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 TAF1DQ9H5J8 278 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-209ENST00000589318 RAVER2Q9HCJ3 691 aaKnown RBP17.27■□□□□ 0.36
DDX39A-209ENST00000589318 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
DDX39A-209ENST00000589318 VGLL3A8MV65 326 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 VWA5AO00534 786 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 NFIBO00712 420 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 SMC2O95347 1197 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 CYP2C19P33261 490 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 CUL4BQ13620 913 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 TPD52L1Q16890 204 aaPredicted RBP17.27■□□□□ 0.35
DDX39A-209ENST00000589318 REPS2Q8NFH8 660 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.35
DDX39A-209ENST00000589318 GSDMAQ96QA5 445 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 EFCC1Q9HA90 598 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 KCND1Q9NSA2 647 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 ADAMTS5Q9UNA0 930 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 LOC285556D6RIA3 1793 aa17.27■□□□□ 0.35
DDX39A-209ENST00000589318 BECN2A8MW95 431 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-209ENST00000589318 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-209ENST00000589318 TUBB4AP04350 444 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 GRB10Q13322 594 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 PRR16Q569H4 304 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 CPXCR1Q8N123 301 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 PNMA5Q96PV4 448 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 NUDT12Q9BQG2 462 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
DDX39A-209ENST00000589318 IGLV3-22A0A075B6J6 115 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 GOLGA6L19H0YKK7 550 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 FDX1P10109 184 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 MUM1L1Q5H9M0 696 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 CCDC186Q7Z3E2 898 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 RAB34Q9BZG1 259 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 COL20A1Q9P218 1284 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 IKBKBO14920 756 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 TBX3O15119 743 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 ALAS1P13196 640 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 DSG3P32926 999 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 SPIRE1Q08AE8 756 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 SARM1Q6SZW1 724 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 CATSPERGQ6ZRH7 1159 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 RASSF8Q8NHQ8 419 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 UIMC1Q96RL1 719 aa17.25■□□□□ 0.35
DDX39A-209ENST00000589318 ZBED4O75132 1171 aa17.24■□□□□ 0.35
DDX39A-209ENST00000589318 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
DDX39A-209ENST00000589318 MOB2Q70IA6 237 aa17.24■□□□□ 0.35
DDX39A-209ENST00000589318 SLFN12Q8IYM2 578 aa17.24■□□□□ 0.35
DDX39A-209ENST00000589318 MLKLQ8NB16 471 aa17.24■□□□□ 0.35
DDX39A-209ENST00000589318 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
DDX39A-209ENST00000589318 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms