RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 NUP62CLQ9H1M0 184 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 KCNH3Q9ULD8 1083 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 HPSEQ9Y251 543 aa25.19■■□□□ 1.62
ATG4D-209ENST00000588857 TXKP42681 527 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 UBXN2AP68543 259 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 Q4G0T1 1027 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 PRR16Q569H4 304 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 RPTORQ8N122 1335 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 MOV10L1Q9BXT6 1211 aaKnown RBP25.18■■□□□ 1.62
ATG4D-209ENST00000588857 TXNRD2Q9NNW7 524 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 A1CFQ9NQ94 594 aaKnown RBP25.18■■□□□ 1.62
ATG4D-209ENST00000588857 CYP39A1Q9NYL5 469 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 TESPA1A2RU30 521 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-209ENST00000588857 LETM1O95202 739 aaPredicted RBP25.18■■□□□ 1.62
ATG4D-209ENST00000588857 TMEM266Q2M3C6 531 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 ANKRD35Q8N283 1001 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 FAM43AQ8N2R8 423 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 SYMPKQ92797 1274 aaKnown RBP25.18■■□□□ 1.62
ATG4D-209ENST00000588857 TAAR1Q96RJ0 339 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 RMDN3Q96TC7 470 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 CLSTN2Q9H4D0 955 aa25.18■■□□□ 1.62
ATG4D-209ENST00000588857 PFASO15067 1338 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 FAM86B1E9PN63 330 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 ZNF202O95125 648 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 FAM86B2P0C5J1 330 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 ARHGEF16Q5VV41 709 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 EPSTI1Q96J88 318 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 PARK7Q99497 189 aaKnown RBP25.17■■□□□ 1.62
ATG4D-209ENST00000588857 PTPN18Q99952 460 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 RAB34Q9BZG1 259 aa25.17■■□□□ 1.62
ATG4D-209ENST00000588857 TXLNAP40222 546 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 GCLCP48506 637 aaPredicted RBP25.16■■□□□ 1.62
ATG4D-209ENST00000588857 USP49Q70CQ1 688 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 SLFN12Q8IYM2 578 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 TNS4Q8IZW8 715 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 AK8Q96MA6 479 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 TNMDQ9H2S6 317 aa25.16■■□□□ 1.62
ATG4D-209ENST00000588857 FRMPD4Q14CM0 1322 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 TBX3O15119 743 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 ERCC3P19447 782 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 EIF2AK2P19525 551 aaKnown RBP25.15■■□□□ 1.62
ATG4D-209ENST00000588857 TECP42680 631 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 ERVK-9P63128 1117 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 ERVK-24P63145 666 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 CAMK4Q16566 473 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 GPRC5AQ8NFJ5 357 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 PXMP2Q9NR77 195 aa25.15■■□□□ 1.62
ATG4D-209ENST00000588857 FXR2P51116 673 aaKnown RBP eCLIP25.14■■□□□ 1.62
ATG4D-209ENST00000588857 CCNA1P78396 465 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 Q3C1V9 767 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 CEP55Q53EZ4 464 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 PCNX4Q63HM2 1172 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 NSUN6Q8TEA1 469 aaKnown RBP25.14■■□□□ 1.62
ATG4D-209ENST00000588857 HAS1Q92839 578 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 MROH8Q9H579 483 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 TTC12Q9H892 705 aaPredicted RBP25.14■■□□□ 1.62
ATG4D-209ENST00000588857 KCNMB3Q9NPA1 279 aa25.14■■□□□ 1.62
ATG4D-209ENST00000588857 SYCE3A1L190 88 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 PGM5Q15124 567 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 IFNL1Q8IU54 200 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 CYP2W1Q8TAV3 490 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 LENG9Q96B70 501 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 FAM20AQ96MK3 541 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 TIGD1Q96MW7 591 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 SDF4Q9BRK5 362 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 PCDHA12Q9UN75 941 aa25.14■■□□□ 1.61
ATG4D-209ENST00000588857 LCTP09848 1927 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 IGLV3-22A0A075B6J6 115 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 CTAGE5O15320 804 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 POLR2DO15514 142 aaKnown RBP25.13■■□□□ 1.61
ATG4D-209ENST00000588857 UBA7P41226 1012 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 PDIA5Q14554 519 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 PLA2G4DQ86XP0 818 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 SHCBP1Q8NEM2 672 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 PURBQ96QR8 312 aaKnown RBP25.13■■□□□ 1.61
ATG4D-209ENST00000588857 PDCD2LQ9BRP1 358 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 PANK2Q9BZ23 570 aa25.13■■□□□ 1.61
ATG4D-209ENST00000588857 ZCCHC17Q9NP64 241 aaKnown RBP25.13■■□□□ 1.61
ATG4D-209ENST00000588857 ZNFX1Q9P2E3 1918 aaKnown RBP25.13■■□□□ 1.61
ATG4D-209ENST00000588857 TBC1D8O95759 1140 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 ALDH1A1P00352 501 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 SETQ01105 290 aaPredicted RBP25.12■■□□□ 1.61
ATG4D-209ENST00000588857 XRRA1Q6P2D8 792 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 ANKRD13CQ8N6S4 541 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 PDILTQ8N807 584 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 IGSF22Q8N9C0 903 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 IL31RAQ8NI17 732 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 ETNPPLQ8TBG4 499 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 MXRA8Q9BRK3 442 aa25.12■■□□□ 1.61
ATG4D-209ENST00000588857 PYM1Q9BRP8 204 aaKnown RBP25.12■■□□□ 1.61
ATG4D-209ENST00000588857 IGF2BP3O00425 579 aaKnown RBP eCLIP25.11■■□□□ 1.61
ATG4D-209ENST00000588857 MEIS1O00470 390 aa25.11■■□□□ 1.61
ATG4D-209ENST00000588857 MSH4O15457 936 aa25.11■■□□□ 1.61
ATG4D-209ENST00000588857 WDR78Q5VTH9 848 aa25.11■■□□□ 1.61
ATG4D-209ENST00000588857 CFHR5Q9BXR6 569 aa25.11■■□□□ 1.61
ATG4D-209ENST00000588857 LRWD1Q9UFC0 647 aa25.11■■□□□ 1.61
ATG4D-209ENST00000588857 MYCLP12524 364 aaPredicted RBP25.1■■□□□ 1.61
ATG4D-209ENST00000588857 CCND2P30279 289 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 CDC25AP30304 524 aa25.1■■□□□ 1.61
ATG4D-209ENST00000588857 ZNF445P59923 1031 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms