RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
BCAS3-220ENST00000588720 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
BCAS3-220ENST00000588720 PCDHA6Q9UN73 950 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 PCDHA8Q9Y5H6 950 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L11C9JVI0 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L18D6R9N7 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L22D6RA61 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L17D6RBQ6 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L19D6RCP7 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L20D6RJB6 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
BCAS3-220ENST00000588720 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L24Q0WX57 530 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 CUL4BQ13620 913 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 FNBP1Q96RU3 617 aa12.66□□□□□ -0.38
BCAS3-220ENST00000588720 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
BCAS3-220ENST00000588720 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
BCAS3-220ENST00000588720 HSF2BPO75031 334 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
BCAS3-220ENST00000588720 SEPT6Q14141 434 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 HLTFQ14527 1009 aaKnown RBP eCLIP12.65□□□□□ -0.38
BCAS3-220ENST00000588720 NTRK3Q16288 839 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 SFMBT2Q5VUG0 894 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 COBLO75128 1261 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
BCAS3-220ENST00000588720 UBXN2AP68543 259 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 STRN3Q13033 797 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 SLC16A10Q8TF71 515 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 CASP14P31944 242 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 KLHL30Q0D2K2 578 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
BCAS3-220ENST00000588720 PDHBP11177 359 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
BCAS3-220ENST00000588720 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 METTL16Q86W50 562 aaKnown RBP12.64□□□□□ -0.39
BCAS3-220ENST00000588720 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
BCAS3-220ENST00000588720 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 SNAP25P60880 206 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 RETREG2Q8NC44 543 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 SECISBP2LQ93073 1101 aaKnown RBP12.64□□□□□ -0.39
BCAS3-220ENST00000588720 NACC1Q96RE7 527 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 DESI2Q9BSY9 194 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 GAP43P17677 238 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 CEP83Q9Y592 693 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 PLSCR1O15162 318 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 CASP1P29466 404 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 ARHGAP4P98171 946 aa12.64□□□□□ -0.39
BCAS3-220ENST00000588720 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
BCAS3-220ENST00000588720 POTEMA6NI47 508 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 XKR9Q5GH70 373 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 STMN4Q9H169 189 aaPredicted RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 FEM1BQ9UK73 627 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 GDAQ9Y2T3 454 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 BIRC3Q13489 604 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 ODR4Q5SWX8 454 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 FAM205AQ6ZU69 1335 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 NCBP1Q09161 790 aaKnown RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 WDR44Q5JSH3 913 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 RSBN1LQ6PCB5 846 aaPredicted RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
BCAS3-220ENST00000588720 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
BCAS3-220ENST00000588720 STXBP3O00186 592 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 FOXN1O15353 648 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 USP11P51784 963 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 DDR1Q08345 913 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 IQCB1Q15051 598 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 LRRC41Q15345 812 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
BCAS3-220ENST00000588720 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms