RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SCFD2Q8WU76 684 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 AIFM3Q96NN9 605 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 PCDHA6Q9UN73 950 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 PCDHA8Q9Y5H6 950 aa23.19■■□□□ 1.3
DDX39A-207ENST00000588542 DOCK5Q9H7D0 1870 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 MYADML2A6NDP7 307 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 CTAGE5O15320 804 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 ARIH2O95376 493 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 NKX3-2P78367 333 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 CCDC62Q6P9F0 684 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 SEPT14Q6ZU15 432 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 NECAB2Q7Z6G3 386 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 NSUN7Q8NE18 718 aaKnown RBP23.18■■□□□ 1.3
DDX39A-207ENST00000588542 CCDC12Q8WUD4 166 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-207ENST00000588542 ZFP91Q96JP5 570 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-207ENST00000588542 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 SH3GLB2Q9NR46 395 aa23.18■■□□□ 1.3
DDX39A-207ENST00000588542 FDPSP14324 419 aaKnown RBP23.17■■□□□ 1.3
DDX39A-207ENST00000588542 CCSAPQ6IQ19 270 aaPredicted RBP23.17■■□□□ 1.3
DDX39A-207ENST00000588542 RNF180Q86T96 592 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 TLK2Q86UE8 772 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 C11orf49Q9H6J7 331 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 TMEM260Q9NX78 707 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 Q9Y3F1 56 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 PDE4DIPQ5VU43 2346 aa23.17■■□□□ 1.3
DDX39A-207ENST00000588542 SPDYE3A6NKU9 549 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 CD2BP2O95400 341 aaKnown RBP23.16■■□□□ 1.3
DDX39A-207ENST00000588542 MYCNP04198 464 aaPredicted RBP23.16■■□□□ 1.3
DDX39A-207ENST00000588542 CST5P28325 142 aaPredicted RBP23.16■■□□□ 1.3
DDX39A-207ENST00000588542 PCNX4Q63HM2 1172 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 CCDC148Q8NFR7 591 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 PGBD1Q96JS3 809 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
DDX39A-207ENST00000588542 C6orf50Q9HD87 102 aa23.16■■□□□ 1.3
DDX39A-207ENST00000588542 KBTBD13C9JR72 458 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 DYNC1LI2O43237 492 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-207ENST00000588542 ST18O60284 1047 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 FOSP01100 380 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-207ENST00000588542 C6orf222P0C671 652 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-207ENST00000588542 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
DDX39A-207ENST00000588542 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 XRRA1Q6P2D8 792 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 COPS5Q92905 334 aa23.15■■□□□ 1.3
DDX39A-207ENST00000588542 ORC3Q9UBD5 711 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-207ENST00000588542 NKRFO15226 690 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDX39A-207ENST00000588542 JAK2O60674 1132 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 STAM2O75886 525 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 GNA11P29992 359 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 AP3B2Q13367 1082 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 LY6KQ17RY6 165 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 JAKMIP3Q5VZ66 844 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 INPP4AQ96PE3 977 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-207ENST00000588542 ANO3Q9BYT9 981 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 SPC25Q9HBM1 224 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 SH2B1Q9NRF2 756 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-207ENST00000588542 DDX41Q9UJV9 622 aaKnown RBP23.14■■□□□ 1.29
DDX39A-207ENST00000588542 PHF24Q9UPV7 400 aa23.14■■□□□ 1.29
DDX39A-207ENST00000588542 BEX3Q00994 111 aa23.13■■□□□ 1.29
DDX39A-207ENST00000588542 NPY5RQ15761 445 aa23.13■■□□□ 1.29
DDX39A-207ENST00000588542 KCNA10Q16322 511 aa23.13■■□□□ 1.29
DDX39A-207ENST00000588542 FAM177A1Q8N128 213 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-207ENST00000588542 REXO1Q8N1G1 1221 aaKnown RBP23.13■■□□□ 1.29
DDX39A-207ENST00000588542 TSEN34Q9BSV6 310 aaKnown RBP23.13■■□□□ 1.29
DDX39A-207ENST00000588542 SENP6Q9GZR1 1112 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-207ENST00000588542 AP5M1Q9H0R1 490 aa23.13■■□□□ 1.29
DDX39A-207ENST00000588542 RTEL1Q9NZ71 1219 aa23.13■■□□□ 1.29
DDX39A-207ENST00000588542 NLRP5P59047 1200 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 SEMA3FQ13275 785 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 GNASQ5JWF2 1037 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 OR6J1Q8NGC5 347 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 BICD2Q8TD16 824 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 RASGRP4Q8TDF6 673 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 EHMT1Q9H9B1 1298 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 GJB4Q9NTQ9 266 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 MRVI1Q9Y6F6 885 aa23.12■■□□□ 1.29
DDX39A-207ENST00000588542 ICAM3P32942 547 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 SREBF1P36956 1147 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 ACLYP53396 1101 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 SP2Q02086 613 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 ARHGAP1Q07960 439 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 FSCN1Q16658 493 aaKnown RBP23.11■■□□□ 1.29
DDX39A-207ENST00000588542 CRYGNQ8WXF5 182 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 FERMT2Q96AC1 680 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 ALG1Q9BT22 464 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 PHF20Q9BVI0 1012 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 PCDHA4Q9UN74 947 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 KCNJ14Q9UNX9 436 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 UBIAD1Q9Y5Z9 338 aa23.11■■□□□ 1.29
DDX39A-207ENST00000588542 A0A1W2PQ45 241 aaPredicted RBP23.1■■□□□ 1.29
DDX39A-207ENST00000588542 A0A1W2PQY0 241 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 MOXD2PA6NHM9 499 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 SPATA31C2B4DYI2 1134 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 M0R2N6 131 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 ASGR1P07306 291 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 TGFB3P10600 412 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 ITGB5P18084 799 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 GNPTABQ3T906 1256 aa23.1■■□□□ 1.29
DDX39A-207ENST00000588542 MCTP2Q6DN12 878 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms