RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	ARRDC4	Q8NCT1	418 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	CLEC4D	Q8WXI8	215 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	MPHOSPH6	Q99547	160 aa	Known RBP	10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	EHMT1	Q9H9B1	1298 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	PDLIM7	Q9NR12	457 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	VPS54	Q9P1Q0	977 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	RIPK3	Q9Y572	518 aa		10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	COL11A1	P12107	1806 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-208	ENST00000587987	EYS	Q5T1H1	3165 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PRUNE2	Q8WUY3	3088 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	LOC102724159	A0A0B4J2E5	919 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	STX6	O43752	255 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PPFIA3	O75145	1194 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MMP1	P03956	469 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	HOXC6	P09630	235 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	COL9A1	P20849	921 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SYT1	P21579	422 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	KRT2	P35908	639 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	HSD17B4	P51659	736 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	NUCB2	P80303	420 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	AP3B2	Q13367	1082 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	GNL2	Q13823	731 aa	Known RBP	10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PWP2	Q15269	919 aa	Known RBP	10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	KRT40	Q6A162	431 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SH3RF1	Q7Z6J0	888 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	BLID	Q8IZY5	108 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	DNER	Q8NFT8	737 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	FERMT2	Q96AC1	680 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	RNPC3	Q96LT9	517 aa	Known RBP	10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MMP19	Q99542	508 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	FOXP1	Q9H334	677 aa	Predicted RBP	10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	FOXD4L1	Q9NU39	408 aa		10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ADD3	Q9UEY8	706 aa	Known RBP	10.83	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TRIM43B	A6NCK2	446 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SPDYE3	A6NKU9	549 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CFB	P00751	764 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ADCYAP1R1	P41586	468 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MUM1L1	Q5H9M0	696 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TJAP1	Q5JTD0	557 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	DPP9	Q86TI2	863 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	REXO1	Q8N1G1	1221 aa	Known RBP	10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	USP38	Q8NB14	1042 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SPRYD3	Q8NCJ5	442 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	AIFM3	Q96NN9	605 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	HOMER2	Q9NSB8	354 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CYP39A1	Q9NYL5	469 aa		10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	DIS3	Q9Y2L1	958 aa	Known RBP	10.82	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ZNF236	Q9UL36	1845 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TMEM265	A0A087WTH1	108 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TNFRSF10A	O00220	468 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MEIS2	O14770	477 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	U2AF2	P26368	475 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ADORA2A	P29274	412 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CLK2	P49760	499 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	RPS6	P62753	249 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TLE2	Q04725	743 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SNX17	Q15036	470 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	OLFML2B	Q68BL8	750 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	TYW1B	Q6NUM6	668 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	XRRA1	Q6P2D8	792 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	NSMF	Q6X4W1	530 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	KRT25	Q7Z3Z0	450 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	BRAP	Q7Z569	592 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	DIS3L2	Q8IYB7	885 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MSL3	Q8N5Y2	521 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	NSUN6	Q8TEA1	469 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	IWS1	Q96ST2	819 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	NAP1L4	Q99733	375 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	A1CF	Q9NQ94	594 aa	Known RBP	10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	RAPGEFL1	Q9UHV5	662 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PCDHA6	Q9UN73	950 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	KCNJ14	Q9UNX9	436 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PCDHA8	Q9Y5H6	950 aa		10.81	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CCDC194	A0A1B0GVG4	234 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	VPS37C	A5D8V6	355 aa	Predicted RBP	10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	NFIB	O00712	420 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	OPLAH	O14841	1288 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SEPT4	O43236	478 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	USP11	P51784	963 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	EPHB4	P54760	987 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	BAAT	Q14032	418 aa	Predicted RBP	10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	GRIN2C	Q14957	1233 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	LRRC41	Q15345	812 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	MCTP1	Q6DN14	999 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ATP6V1D	Q9Y5K8	247 aa		10.8	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	DNAJC25-GNG10	A0A024R161	153 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ASB14	A6NK59	587 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	BTBD18	B2RXH4	712 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987		M0R2N6	131 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	PQBP1	O60828	265 aa	Known RBP	10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	STAM2	O75886	525 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	IGHA2	P01877	340 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	CLTB	P09497	229 aa		10.79	□□□□□ -0.68
U2AF1L4-208	ENST00000587987	ZSCAN22	P10073	491 aa	Predicted RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms