RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.09
TRIM47-205ENST00000587774 AFG1LQ8WV93 481 aa21.83■■□□□ 1.09
TRIM47-205ENST00000587774 VWCEQ96DN2 955 aa21.83■■□□□ 1.09
TRIM47-205ENST00000587774 GH1P01241 217 aa21.82■■□□□ 1.08
TRIM47-205ENST00000587774 WTAPQ15007 396 aa21.82■■□□□ 1.08
TRIM47-205ENST00000587774 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
TRIM47-205ENST00000587774 PCDHA1Q9Y5I3 950 aa21.82■■□□□ 1.08
TRIM47-205ENST00000587774 MUC3AQ02505 3323 aa21.82■■□□□ 1.08
TRIM47-205ENST00000587774 CYTH3O43739 400 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 NR3C2P08235 984 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 ANTXR2P58335 489 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 TROAPQ12815 778 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 SART3Q15020 963 aaKnown RBP21.81■■□□□ 1.08
TRIM47-205ENST00000587774 MAP4K1Q92918 833 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 PIGSQ96S52 555 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
TRIM47-205ENST00000587774 RBM8AQ9Y5S9 174 aaKnown RBP21.81■■□□□ 1.08
TRIM47-205ENST00000587774 SIP14410 1827 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 HOXA13P31271 388 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-205ENST00000587774 CHMP4BP1P59074 171 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 PTPN11Q06124 597 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-205ENST00000587774 TMEM67Q5HYA8 995 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 MB21D2Q8IYB1 491 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-205ENST00000587774 RPUSD2Q8IZ73 545 aaKnown RBP21.8■■□□□ 1.08
TRIM47-205ENST00000587774 PDCD2LQ9BRP1 358 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 DDX41Q9UJV9 622 aaKnown RBP21.8■■□□□ 1.08
TRIM47-205ENST00000587774 MRVI1Q9Y6F6 885 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 XIRP2A4UGR9 3374 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 LOXHD1Q8IVV2 1947 aa21.8■■□□□ 1.08
TRIM47-205ENST00000587774 EIF3JO75822 258 aaKnown RBP21.79■■□□□ 1.08
TRIM47-205ENST00000587774 IL31RAQ8NI17 732 aa21.79■■□□□ 1.08
TRIM47-205ENST00000587774 MAP3K20Q9NYL2 800 aaKnown RBP21.79■■□□□ 1.08
TRIM47-205ENST00000587774 NLRC5Q86WI3 1866 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 PITPNM1O00562 1244 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 RAB30Q15771 203 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 DEFB128Q7Z7B8 93 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 IGDCC4Q8TDY8 1250 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 KAT2BQ92831 832 aa21.78■■□□□ 1.08
TRIM47-205ENST00000587774 EMID1Q96A84 441 aaPredicted RBP21.78■■□□□ 1.08
TRIM47-205ENST00000587774 RGS20O76081 388 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 PFKMP08237 780 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 MYCLP12524 364 aaPredicted RBP21.77■■□□□ 1.08
TRIM47-205ENST00000587774 PGM5Q15124 567 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 CATIPQ7Z7H3 387 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 MSRAQ9UJ68 235 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 NOD1Q9Y239 953 aa21.77■■□□□ 1.08
TRIM47-205ENST00000587774 YBX2Q9Y2T7 364 aaKnown RBP21.77■■□□□ 1.08
TRIM47-205ENST00000587774 PNMA6FA0A0J9YX94 578 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 ZBBXA8MT70 800 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 CASTP20810 708 aaKnown RBP21.76■■□□□ 1.07
TRIM47-205ENST00000587774 PTGISQ16647 500 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 DGKDQ16760 1214 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 GDF6Q6KF10 455 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-205ENST00000587774 SESTD1Q86VW0 696 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 SAMD3Q8N6K7 520 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 CTAGE1Q96RT6 745 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 MYL10Q9BUA6 226 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 COL25A1Q9BXS0 654 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-205ENST00000587774 NKX2-4Q9H2Z4 354 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 SLC4A7Q9Y6M7 1214 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 WDR81Q562E7 1941 aa21.76■■□□□ 1.07
TRIM47-205ENST00000587774 GCOM1H8Y6P7 765 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-205ENST00000587774 IQCF3P0C7M6 154 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 POLR2MP0CAP2 368 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 ZNF286BP0CG31 522 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 RFC2P35250 354 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 RABGGTBP53611 331 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 TRAF1Q13077 416 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 COL9A3Q14050 684 aaPredicted RBP21.75■■□□□ 1.07
TRIM47-205ENST00000587774 ZNF654Q8IZM8 581 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 PPTC7Q8NI37 304 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 LSG1Q9H089 658 aaKnown RBP21.75■■□□□ 1.07
TRIM47-205ENST00000587774 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
TRIM47-205ENST00000587774 PRRC2BQ5JSZ5 2229 aaKnown RBP21.74■■□□□ 1.07
TRIM47-205ENST00000587774 SORBS3O60504 671 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 F2P00734 622 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 BFSP2Q13515 415 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 LAMC2Q13753 1193 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 VSIG10LQ86VR7 867 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 FCHSD1Q86WN1 690 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 DHX37Q8IY37 1157 aaKnown RBP21.74■■□□□ 1.07
TRIM47-205ENST00000587774 USP38Q8NB14 1042 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 PIBF1Q8WXW3 757 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 ZFP91Q96JP5 570 aaPredicted RBP21.74■■□□□ 1.07
TRIM47-205ENST00000587774 FRMPD4Q14CM0 1322 aa21.74■■□□□ 1.07
TRIM47-205ENST00000587774 PRC1O43663 620 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 DDAH1O94760 285 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 CCND2P30279 289 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 PSEN2P49810 448 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 CASC1Q6TDU7 716 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 RETREG2Q8NC44 543 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 GAS2L1Q99501 681 aaPredicted RBP21.73■■□□□ 1.07
TRIM47-205ENST00000587774 ESYT1Q9BSJ8 1104 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 KATNAL1Q9BW62 490 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 SPZ1Q9BXG8 430 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 SLC28A3Q9HAS3 691 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 GTF2IRD1Q9UHL9 959 aa21.73■■□□□ 1.07
TRIM47-205ENST00000587774 TCF20Q9UGU0 1960 aaKnown RBP21.73■■□□□ 1.07
TRIM47-205ENST00000587774 TTC28Q96AY4 2481 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms