RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 B4DLN1 442 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 GH1P01241 217 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 ZNF286BP0CG31 522 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 MRPL12P52815 198 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 GDF6Q6KF10 455 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 HOMER1Q86YM7 354 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 KAT2BQ92831 832 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 PXMP2Q9NR77 195 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 NOD1Q9Y239 953 aa17.7■□□□□ 0.42
PRKCSH-204ENST00000587290 XIRP2A4UGR9 3374 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 COL4A4P53420 1690 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 ARHGEF15O94989 841 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 CYP21A2P08686 494 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 STXBP2Q15833 593 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 PTGISQ16647 500 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 AMNQ9BXJ7 453 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 CERS4Q9HA82 394 aa17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-204ENST00000587290 RFXAPO00287 272 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 KPNA6O60684 536 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 CA3P07451 260 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 NR3C2P08235 984 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 MYCLP12524 364 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 NT5C2P49902 561 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 HSD17B4P51659 736 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 SPRED2Q7Z698 418 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 TMCO2Q7Z6W1 182 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 DHX38Q92620 1227 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
PRKCSH-204ENST00000587290 TRANK1O15050 2925 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PALM3A6NDB9 673 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PITPNM1O00562 1244 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 RGS20O76081 388 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 CHMLP26374 656 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PIBF1Q8WXW3 757 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 GPKOWQ92917 476 aaPredicted RBP eCLIP17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 MTMR8Q96EF0 704 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PIGSQ96S52 555 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 IWS1Q96ST2 819 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 ALG1Q9BT22 464 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PCDHA11Q9Y5I1 949 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 PCDHA1Q9Y5I3 950 aa17.67■□□□□ 0.42
PRKCSH-204ENST00000587290 EPOPA6NHQ4 379 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 IFIT3O14879 490 aaKnown RBP17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 ZBTB5O15062 677 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 CYTH3O43739 400 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 PFKMP08237 780 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 GRM4Q14833 912 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 GPNMBQ14956 572 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 TCTN1Q2MV58 587 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 WNT8BQ93098 351 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 PDCD2LQ9BRP1 358 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 HDAC6Q9UBN7 1215 aa17.66■□□□□ 0.42
PRKCSH-204ENST00000587290 EIF3JO75822 258 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 ACTN1P12814 892 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 CASTP20810 708 aaKnown RBP17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 PSEN2P49810 448 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 ZNF200P98182 395 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 TRDNQ13061 729 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 BFSP2Q13515 415 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 HIC1Q14526 733 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 DGKDQ16760 1214 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 TMEM67Q5HYA8 995 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 TJAP1Q5JTD0 557 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 KRT40Q6A162 431 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 FCHSD1Q86WN1 690 aa17.65■□□□□ 0.42
PRKCSH-204ENST00000587290 E7EWF7 191 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 RFC2P35250 354 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 ANTXR2P58335 489 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 SP2Q02086 613 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 GHRHRQ02643 423 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 COL9A3Q14050 684 aaPredicted RBP17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 MFSD10Q14728 455 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 PGM5Q15124 567 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 DHX37Q8IY37 1157 aaKnown RBP17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 BCAS3Q9H6U6 928 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 THEGQ9P2T0 379 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 GTF2IRD1Q9UHL9 959 aa17.64■□□□□ 0.41
PRKCSH-204ENST00000587290 NCOR1O75376 2440 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 GGPS1O95749 300 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 F2P00734 622 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 UBA1P22314 1058 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 WTAPQ15007 396 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 KIAA0753Q2KHM9 967 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 HSDL1Q3SXM5 330 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 LRRC8DQ7L1W4 858 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 RALYLQ86SE5 291 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 SESTD1Q86VW0 696 aa17.63■□□□□ 0.41
PRKCSH-204ENST00000587290 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms